| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0518 |
|---|
| Symbol | |
|---|
| ID | 3230189 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | - |
|---|
| Start bp | 471674 |
|---|
| End bp | 472678 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637120084 |
|---|
| Product | aIF-2BI family translation initiation factor |
|---|
| Protein accession | YP_181262 |
|---|
| Protein GI | 57234720 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family |
|---|
| TIGRFAM ID | [TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase
[TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.294825 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAA TTGAGTGGCG GGATAACCGC CTGATAATAC TTGACCAAAC CCTGTTGCCG
CTGGAAGAAA AATACCTGGA ACTAAATGAC TACCACGCCG TTGCCGAGGC CATCAAGACC
CTTAGGGTAA GGGGCGCACC CTCCATAGGC GTAGCCGCCG CTTACGGCAT AGCTCTGGGG
GCACTGGGCA TAGAAACCCA ATATTGCAGT GAGTTTCTGC CCCTTTACCA GCAGGTATCA
GCAGAGATTG CCTCCACCCG CCCTACCGCT AAAAACCTGT TTATGGCGGC AGAACGCATG
GACCATGTGG TAGCTTCGGG GACAGATGTT TCACAGGTAA AAATATCTCT GGTAGAAGAA
GCGGTAAAAA TCCACCATGA AGAAGAAGAG GCCAGCCGCA AAATATCCGC CTTCGGGGCG
GAGCTGATAC AACCCGGCTG GACCGTGCTC ACCCACTGCA ACGCAGGCCC GCTGGCAACG
GCCGGTTACG GCACGGCTCT GGGGGTGATT ATAGCCGCCC ATCAGCAGGG CAAAAATATT
TCTGCCTTTG CCACCGAAAC CCGCCCCCTT CTTCAAGGGG CACGCCTGAC CGCACTGGAA
TTGAAAGAAG CCGGCATACC CTTTAAACTG ATTACCGACA GTATGGCCGG ACACTTTATG
CAAAAAGGGG TAATCAACGC GGTGGTAGTG GGGGCAGACC GTATTGCCAA AAACGGAGAC
ACCGCCAACA AGATAGGCAC TTACTCTCTG GCAGTGCTGG CGCTGGCTCA CGGCATACCC
TTTTACGTAG CCGCACCCAG CTCCACCTTT GATAAATCCA TTGAATCAGG CCGGGATATA
GTTATAGAAG AGCGCAAACC TGAGGAAATA ACCCAAATAA GGGGGCAGCG CATAGCCCCG
GAAAACATAG CAGTAGCCAA CCCCGCTTTT GACGTAACTC CGGCTAACCT CATAACCGCT
TTTATAACTG AAAACGGGAT AATACGGCGA GAGGCTAAAA ATTAG
|
|---|
| Protein sequence | MKAIEWRDNR LIILDQTLLP LEEKYLELND YHAVAEAIKT LRVRGAPSIG VAAAYGIALG
ALGIETQYCS EFLPLYQQVS AEIASTRPTA KNLFMAAERM DHVVASGTDV SQVKISLVEE
AVKIHHEEEE ASRKISAFGA ELIQPGWTVL THCNAGPLAT AGYGTALGVI IAAHQQGKNI
SAFATETRPL LQGARLTALE LKEAGIPFKL ITDSMAGHFM QKGVINAVVV GADRIAKNGD
TANKIGTYSL AVLALAHGIP FYVAAPSSTF DKSIESGRDI VIEERKPEEI TQIRGQRIAP
ENIAVANPAF DVTPANLITA FITENGIIRR EAKN
|
|---|
| |