Gene DET0408 details

Gene Information

• Locus tag: DET0408
• ID: 3230289
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: -
• Start bp: 385554
• End bp: 386363
• Gene Length: 810 bp
• Protein Length: 269 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637119974
• Product: cation channel family protein
• Protein accession: YP_181153
• Protein GI: 57234820

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAGTC ATGATACTAT GAAAAAGGTG CACGACCTGC TGACCTTTGG CTTTGAAAGC 
CAGCCCCGCA AGTTTATCAG CTGGTTTATC ATCAGCCTTA TCTGTTTAAA TGTGCTGGCG 
GTTATACTCG GTTCGGTAGA TACCATTGCA CGTGATTATC ATACCCTGCT TCATAGTTTT 
GAAATATTTT CAGTGACAGT ATTCAGCCTG GAATATATTT TGCGGGTGTG GAGCTGTACC 
GTTGAGCCGA AGTATTCGCA CCCTTTTACC GGACGGATAC GCTTTGCCTT ATCCCCGCTG 
GTGCTGATGG ATTTACTGGC TATCCTGCCC TTCTACCTGC CGTTCCTTAT ACGCGTAGAC 
CTGCGTTTCT TGAGAACCCT GCGGCTCCTG CGGTTATTCC GCTTAAGCCA TCTGAAGCGC 
TTCAACGAAA CCTCCCACAT GATTCTAAAC GTACTCCGCG AACGCAGAGA AGCCCTGATA 
ATATCTTTTT CCATTATTTT GCTGCTGGTT ATTATTACTT CCAGCCTGAT GTACTTCGTG 
GAAAACCCGG CTCAGCCGGA AGTGTTTAAA AATATACCTG ATGCCATGTG GTGGTCTGTT 
ATGACCATGA CTACGGTAGG TTACGGTGAT ATTTACCCCA TCACCGCACT GGGGAAATTT 
CTGGGGAGTG TTATCGCTGT ACTGGGGCTG GCTGTCTTCG CTTTGCCGAC CGCCATTTTA 
TCCGCTGGGC TGCTGGAAGA ATTCCGCAGG AAAAAGGAAC TGAACGAACA CATCTGCCCC 
GTCTGCGGGC AGGAAATACC AAAACACTAA 

 

Protein sequence

MTSHDTMKKV HDLLTFGFES QPRKFISWFI ISLICLNVLA VILGSVDTIA RDYHTLLHSF 
EIFSVTVFSL EYILRVWSCT VEPKYSHPFT GRIRFALSPL VLMDLLAILP FYLPFLIRVD 
LRFLRTLRLL RLFRLSHLKR FNETSHMILN VLRERREALI ISFSIILLLV IITSSLMYFV 
ENPAQPEVFK NIPDAMWWSV MTMTTVGYGD IYPITALGKF LGSVIAVLGL AVFALPTAIL 
SAGLLEEFRR KKELNEHICP VCGQEIPKH