| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0332 |
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| Symbol | secF |
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| ID | 3230396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 316155 |
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| End bp | 317060 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637119899 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_181079 |
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| Protein GI | 57234927 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.496269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAAGA TAATCCAGCA CCGACCCCTG TTTATATTTA TATCAGCCCT GATTATACTT
GCCGGGCTGG CTTCGCTGCT GATATTCGGG CTGAAACCCG GCATAGACTT TTCCAGCGGC
TCCATTCTGA CCATCAAATT TGACCAGACA GTCAGCGTGG ATGAGCTTAC CCAGGAGCTT
AGAAGCCTGG GGCAGAGCGA AGCTATTGTT CAGGTAACCG GTGACGGAGA CTTCCTTATC
CGCACCAGCG AGCTTGATAT CAGCCAGAAG GTCACTCTGG AAACCGCTCT GGAAGAAGCC
TTCGGCAACC TAACTGAACG CGGCTTTGAA AATGTAGACC CCCTGATTGC CAAGCAGACC
ACCCAAATGG CCCTGATAGC TATCGGAGCG GCTCTGGTAG GTATTCTGCT GTATGTTACC
TGGGCTTTCC GCCGTATGCC CAAGCCGTTC CACTACGGCA CCTGCGCAGT CATAGCCCTG
TTCCATGACG CACTGGTAGT GCTGGGCATT TTCGCCCTGC TGGCCGGCAT ATTTGGCTGG
GAAATTAACC TCATGTTTGT TATCGGCATC ATGGCGGTTA TCGGCTACAG TATAAATAAC
ACCGTGGTAG TCTTTGACCG CATACGGGAA AACCAGCTTA AAGGCATTCA CCCCAGCTTT
GATGTAGTAG TAAACCAGAG CATTATGGAA ACGATAGTCC GTTCTATCAA CTCCAGCTTT
ACGGTTATCA TTACCGTAGT AGCCCTTATG CTTTTCCTGG GGGCATCTAT CCAGAATCTG
AGCGTAGTCC TGCTTATCGG TCTTATTGCC GGTACTTATG ACTCACTCTT TGTCGCCCCT
TCCCTGCTGG TCACCTGGGA AAACGGTGAC TGGGGCAAAC TACTTAAGCC CTTTAAGAGA
GCTTAA
|
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| Protein sequence | MNKIIQHRPL FIFISALIIL AGLASLLIFG LKPGIDFSSG SILTIKFDQT VSVDELTQEL
RSLGQSEAIV QVTGDGDFLI RTSELDISQK VTLETALEEA FGNLTERGFE NVDPLIAKQT
TQMALIAIGA ALVGILLYVT WAFRRMPKPF HYGTCAVIAL FHDALVVLGI FALLAGIFGW
EINLMFVIGI MAVIGYSINN TVVVFDRIRE NQLKGIHPSF DVVVNQSIME TIVRSINSSF
TVIITVVALM LFLGASIQNL SVVLLIGLIA GTYDSLFVAP SLLVTWENGD WGKLLKPFKR
A
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