Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0304 |
Symbol | |
ID | 3230335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 291965 |
End bp | 292636 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637119871 |
Product | response regulator |
Protein accession | YP_181052 |
Protein GI | 57234866 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACGAA TACTTATTGT TGAAGATGAC TTTAAAACCG CTGATGCGTT TGTCTCTATT TTCAAGTTAA CATGGCCAAA CGCTGAAATC TTTACAGCTC AGACTGGCTG GGAGGGAATT AGATTATTAG AAGAATACTC CCCTCATATA ATTATTCTGG ATATCGGGTT GCCAGATATC AACGGATTTG AAGTAATTTC AGAAATAAGG CATTTTACTG ATATTCCTAT AATGGTTATT ACCGCCCGCA CCGATGAACT AGATGTTGTA AAAGCCCTAG AATTAGGAGC AAATGATTTT ATTAGCAAAC CACCCCGTAA AATGGAACTC ATTGCCAGAA TAAAAGCTTT AATCCGCAAG AAAAGTGTTG ATGATCTTAG CTTTGGCAAT ATCAATTTTG ATAAAATTCA AAGAACAATC CATATTAATA ACAGCAAAGT TGACCTGAGT GTTTACGAAA GCCTCCTATT TGAAAAACTT ATCCTTGCAG CACCTAATAC AGCCACTTAT ACTCAACTCA CTGAACACCT ATGGGGAGAA GACAACGAAG AAAATATAAA GAAATTGAAG GTCCATATAC AATACCTTAG AACTAAGATA GAGAAATCTA CAGGTAATTC CTCAGTTATA ATAAACAGAT CTGGCTTAGG TTATTTTCTA AGAAATCCGT AG
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Protein sequence | MERILIVEDD FKTADAFVSI FKLTWPNAEI FTAQTGWEGI RLLEEYSPHI IILDIGLPDI NGFEVISEIR HFTDIPIMVI TARTDELDVV KALELGANDF ISKPPRKMEL IARIKALIRK KSVDDLSFGN INFDKIQRTI HINNSKVDLS VYESLLFEKL ILAAPNTATY TQLTEHLWGE DNEENIKKLK VHIQYLRTKI EKSTGNSSVI INRSGLGYFL RNP
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