| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET0244 |
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| Symbol | nrd-1 |
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| ID | 3230414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 234242 |
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| End bp | 235999 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637119811 |
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| Product | ribonucleotide reductase |
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| Protein accession | YP_180992 |
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| Protein GI | 57234945 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTAA GCCAAAATGC CAGGATTGTG CTTGAGAAAC GTTACCTCAA ACGGGACGGG
GACGGGAATA TTGCCGAATC CTCGGAGGAT ATGTTCCGCA GGGTAGCGGA CACGGTGGCG
GCGGCTGAAA ATGCCTATAA CCCGCCTGGT AAGGCTGCCT GTATGGCAGA AGAGTTTTAC
GGCATGATGA CCGGATTTGA GTTCCTGCCC AATTCGCCCA CCCTTCTGAA TGCCGGGCGG
GAACTGGGGC TTTTATCCTC CTGTTTTGTA TTGCCGGTGG CAGATTCGGT TGCGGGGATA
GCGAAAGCTG TCGGCGAAGC CATGGTTATC CACCAGTACG GGGGCGGTAC CGGCTTTGCT
TTTGATGCCA TACGGCCGGA AGATGACCCG GTAAAAAGCG GCCATAAGGT GGCCGGCGGG
CCGGTCAGGC TGGTGGGGGT CTTTTCGGAA GCGGTCAACT ACATAAAGCA GGCCGGGGTG
CGCTGCGGCT GCAATTCGGC CAGTCTGCCG GTAAATCACC CGGACATTTT AAAATTTATC
CGGGCTAAAG ATGAAGGCAG TCACTCCGCC AACTTCGGCA TCAATATTGC CCTGACGGAT
GATTTTATCC GGAAAGTCCG GCGCGGAGAA GATTATGAGC TGGTTAACCC GCGCACCGGA
AGGGTCAGCG GCAGTTTATC CGCCGCCGAG GTCTTTTACC GCATAGCCCG AAGCTCTTGG
GAAACGGGTG ACCCGGGGAT AATGTTTATT GACCGCATAA ATAAAGATAA CCCCACCCCC
CGGCTTGGGG AATTTATAAC TACCGACCCC TGCGGTGGAC AGCCTTTGCT ACCGTACGAA
TCAGCCACTT TGGGGACAAT AAACCTGTCC GGTATGCTCT TGAAAGAAGG CAACTGCTGC
CGGGTGGATT ACCCGCGGCT TGGCGGGCTG ATTGCCAAAG CTGTCCGCTT TCTGGATGAC
GTACTGGAGG TAAACCGCTA TCCGTCAGCC GAGGTTGAAA AAGCGGCTAG GGCCACCCGC
AAAATAGGTC TGGGGTTTAT GGGCTTTGCC GAGATGCTGA TAAAGCTGGG TATCCGCTAT
GATTCAGCGG AAGCGGTATC CGCAGCAGAT GAGCTTATGG CTTTTGTAAA AGAAGCTGCC
TGCCAGGCCA CCGAAGAGCT GGCTCTGGAA CGGGGGGCTT TTCCGGCTTT TGCAGGCAGT
ATATATGCCC AAAAGGGTGC CAAACCCAGA CGGAATGCCA CCTGCCTTAC CTTTACCAAT
ACCGGCACTA CCAGCATTAT TGCCGATACC TCGGTCGGTA TTCACCCCAT ATATTCGCTG
GTTATGGTCC GCAACATACT GGACGGGCAG CGGCTGCTGG ATATAAACCA TGCTTTTGAA
GAAACCGCCA GAGAGAGGGG CTTTTTCAGC CCGGCGCTTA TAGAAAAACT GCTTACTGGG
GAAAGTCCCT GTAACTGCCC GGAGATACCG GAGGATTACC GCCGGTTGCT GGTTACCGCC
CGGGATATTC AGCCGGAATG GTGTATCAGG GTGCAGGCAG CTTTCCAGAA ATATACTGAC
AATGCTATTT CCCAAACGGT CAATTTCCCT GCCGATGCCT CGGTTGAGGA TATCGCAGAT
TTATTCCTTA AAGCCCACGA GCTGGGTCTT AAAGGGGTTA CGGCTTACCG TGACAGCAGC
CGGGAATTGC AGGTGCTTTG CACCGGTGCG GACTGCCGGG ATATAGCCAG AAAGTATTTT
GAGGATTGCT GTGTTTAA
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| Protein sequence | MKLSQNARIV LEKRYLKRDG DGNIAESSED MFRRVADTVA AAENAYNPPG KAACMAEEFY
GMMTGFEFLP NSPTLLNAGR ELGLLSSCFV LPVADSVAGI AKAVGEAMVI HQYGGGTGFA
FDAIRPEDDP VKSGHKVAGG PVRLVGVFSE AVNYIKQAGV RCGCNSASLP VNHPDILKFI
RAKDEGSHSA NFGINIALTD DFIRKVRRGE DYELVNPRTG RVSGSLSAAE VFYRIARSSW
ETGDPGIMFI DRINKDNPTP RLGEFITTDP CGGQPLLPYE SATLGTINLS GMLLKEGNCC
RVDYPRLGGL IAKAVRFLDD VLEVNRYPSA EVEKAARATR KIGLGFMGFA EMLIKLGIRY
DSAEAVSAAD ELMAFVKEAA CQATEELALE RGAFPAFAGS IYAQKGAKPR RNATCLTFTN
TGTTSIIADT SVGIHPIYSL VMVRNILDGQ RLLDINHAFE ETARERGFFS PALIEKLLTG
ESPCNCPEIP EDYRRLLVTA RDIQPEWCIR VQAAFQKYTD NAISQTVNFP ADASVEDIAD
LFLKAHELGL KGVTAYRDSS RELQVLCTGA DCRDIARKYF EDCCV
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