Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET0187 |
Symbol | |
ID | 3230527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 180662 |
End bp | 183643 |
Gene Length | 2982 bp |
Protein Length | 993 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637119754 |
Product | formate dehydrogenase, alpha subunit |
Protein accession | YP_180935 |
Protein GI | 57235057 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.125328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGTCTC AGTTTAGTAG GCGAGATTTC CTCAAGATCA GCGGAGGGAC CGCGGGTCTC TTTGCCACAG CTGGTCTTTT CCGTGGACCC ATCAAGGGTG TTGAGCCCAC GATGGTTGAC ACGCGCCCCC GGTGGGTAAA AGAAACCACC ACCATCTGTC CCTTTGACGC CAGCGGTTGC GGATTTATCT GCTATACCGA TTCGGCCGGC AACCTCACCA ATATGGAAGG TGATCCTGAT AATCCAGTAA ATCGGGGGAG TGCCTGTTCC AAGGGTGCTT CACTGATTCA GCTTCACAAT AACAAACACC GTCTAGAAAA GGTGCTTTAC CGTGCCGCCG GTGCAAGTGA TTGGGAAGAG AAAAGCTGGG ATTGGGCCCT TGGTGAAATT GCCAACAAGG TAAAAGCCAG CCGTGACAGC GGGTTTGTAG CTACAAATGC TGCCGGCAAG ACTGTCAACC GCACCGAGGC TATTGCCTCA CTGGGCGGGG CTACACTGGA CAACGAAGAA TGTTATCTGC TGTCCAAGAT GCTTCGCGCC CTGGGTATTG TCTACCTGGA CAGCCAGGCC AGACTGAGTA CCGCTTCCAG CCTGGAAGCC CTGGCGGCTT CATTCGGGCA TCATGCCATG AACAACAGCT GGACGGATAT CAGCAACGCC AATGTCATTT TGGACATGGG CGGTAACCCG GCTGAAAACT ACCCCGCCTG TTTCTCCCAT TTGGGTGAAG CCATGGGCAA AGGGACAGAG CTTATCAGCG TTGACTGCCG CCTGACCCGG ACTGCGGCCA AGGCCGGCAC ATTCGTTGCC GCCCGCTCCG GTTCGGAGAT TGCCTTTACC GGCGGTCTTA TCAAGTATGT CATTGCTGAT ATTGAAGCCC ACCCCGCAAA TTACAACCTG ACTTATATTA CCGAGTACAC CACTGCCGGC ATGGTAGTAA ATTCCAACTT CAAGGGCCCG GCTGATTTGG ACGGTATGTT TACCGGTTAC AACTCCGCCA GCCATTCTTA CGACCAGTCA AACTGGAGTT TTGCCAAAGC CAGCAACGGC GACCCGATAA TAGACAAAAC CCTGACCAAC CCCAACTGTG TCTTCCAGCT TTTGAAGAAG CAATATGCCC GTTACACCCC GGAAATGGTA GCCGCAACCT GTGGCTGCTC TCAGGCTGAT TTTGCAAAGG TCTGTGCCTC TTTTGCCTCA ACCGGCAAAG CTGACAAGGC CGGCGCTATT ATCTACGCCA TGAGCTCCAC CCAGCACACT TCCGGCGCTC AGACAGTCCG GGCTTATGCC ATACTTCAGA TGCTGCTGGG CAATATCGGC GTATCCGGCG GCGGTTTATT CGCCCTGGGC GGCGAATCTA ACGTACAGGG TGCAGCCGAC AATGGTGTTG CCTGGAACAA ACTGCCCGGT TATTTATCTG CCCCCACTGA AGATGACACC AATTTTGCTG CTTTTGCCGC TAAATCCAGC GAGCAGAACG CAGCCAGCCT TTTGAAGGCC TGGTACGGCT CTAATGCCTC CAGCTCAAAT GGCTTTGGTT TCAGCTTCCT GCCCAAGACA GATACAAATA CCGATTACTC TTATGTAAAT GCTATCAAGC AGATGGCTGC CGGCACTATC AAAGGTGCTT TCGCCTGGGG TGCAAACCCG GTGGTTGAAA GTGCCGCTGC CGCTCAAGCC ACTCAAGCCC TGGCTAAACT GGACTGGCTG GTAGTGACAG ATATGTTTGA ATCTGAAACT GCCGCTTTCT GGAAGAAAGA AGGCATCAGT TCACAAACCG AAGTCTTCCT GCTGCCCGCC GCCTGTTCTT ATGAAAAGGA AGGCAGCGTA ACCAATGCCG ACCGCTGGGT ACAGTGGCGG AACCAGGCCG TAAATGCTCC GGGTGAAGCC AAATCCGAGC TGGAGGTTAT CAGCTCCCTG TTTAGCCGCA TTCAGTCCCT TTATCAGGGC GAAAGCGCTC TTAATGCAGA AGCTATCACC AAGCTCAGCT GGACTTACAG CACCAACCCC TCTGCGGCTG ACGTAGCCAA AGAGATGAAC GGCTATAAAG TATCTTCCCT GCAGCAGCTT GAAAGCCCTG AAGAGCTGAG GACGGACGGA ACGGTTGCCT GCGGCAACAA TCTTTATGTC GGCAGCTTTA CAGATGCCGG TAACCAGATG GCGCGCCGCG AACAGACCGG TGTCTTCCAT GCCGGTTGGG CCTGGAGCTG GCCGGTGAAT ATCCGTATCC TGAACAACCG GGCTTCAGTT GACCTGAGCG GCCAGCCCTT CAATGCGGCT AAACCCGTTG TCAGCTGGAA CGGTATGGGT TGGAGCGGTG ACATTGTTGA CGGCAATAAC CCCCCGGTTA ATCAGAGCGG CGGACTGCCC TTCAAAGGCA CAAGCGGCAG TCAAGGACAA CTCTTTGCCG CTATGGCTGA CGGCCCCATG CCCGAACATT ACGAACCCTG GGAAAGCCCG GTGGACAATG CTCTGTCCGG CACCCAGAAT AATCCGGCCG CTATGGTCTT TGAGGGCGAC ACTAAGGGCA GTGCCGGTGA ATATCCGGTT ATCTGCACTA CTGTACGCAC CGTTGAGCAT AGTCTGGGCG GAGAACTAAC CCGCAATATG CCTTTCCTGG TAGAACTTGC CCCGGCCGCT TATGTGGAAA TATCCGAACA GCTGGCCAGC GAAAAGGGTA TCAAAGCCGG TGATATTGTA AAACTGACCT CGGCCAGAGG CAGCGTGTCA GTGGCTGCGG CCGTTACCAA GCGACTTAAA CCATTCAGTA TTGGCGGCAA GACTGTTCAT CAGGTAGCTA TACCCTATCA CTGGGGCTTT ATGGGAATTG CACAGGGTGA CAGTGCCAAC ACACTTGCCC CGAACACCGC AGACTCCAAC TCCTCCACTC CTGAGTTCAA GGCGTTCCTG GTCAAGGTGG AAAAAGAAGC CGACGGTACC GTACCGACCA TTACCGGACG CTACAAGGTA CTTGAGGACT AA
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Protein sequence | MRSQFSRRDF LKISGGTAGL FATAGLFRGP IKGVEPTMVD TRPRWVKETT TICPFDASGC GFICYTDSAG NLTNMEGDPD NPVNRGSACS KGASLIQLHN NKHRLEKVLY RAAGASDWEE KSWDWALGEI ANKVKASRDS GFVATNAAGK TVNRTEAIAS LGGATLDNEE CYLLSKMLRA LGIVYLDSQA RLSTASSLEA LAASFGHHAM NNSWTDISNA NVILDMGGNP AENYPACFSH LGEAMGKGTE LISVDCRLTR TAAKAGTFVA ARSGSEIAFT GGLIKYVIAD IEAHPANYNL TYITEYTTAG MVVNSNFKGP ADLDGMFTGY NSASHSYDQS NWSFAKASNG DPIIDKTLTN PNCVFQLLKK QYARYTPEMV AATCGCSQAD FAKVCASFAS TGKADKAGAI IYAMSSTQHT SGAQTVRAYA ILQMLLGNIG VSGGGLFALG GESNVQGAAD NGVAWNKLPG YLSAPTEDDT NFAAFAAKSS EQNAASLLKA WYGSNASSSN GFGFSFLPKT DTNTDYSYVN AIKQMAAGTI KGAFAWGANP VVESAAAAQA TQALAKLDWL VVTDMFESET AAFWKKEGIS SQTEVFLLPA ACSYEKEGSV TNADRWVQWR NQAVNAPGEA KSELEVISSL FSRIQSLYQG ESALNAEAIT KLSWTYSTNP SAADVAKEMN GYKVSSLQQL ESPEELRTDG TVACGNNLYV GSFTDAGNQM ARREQTGVFH AGWAWSWPVN IRILNNRASV DLSGQPFNAA KPVVSWNGMG WSGDIVDGNN PPVNQSGGLP FKGTSGSQGQ LFAAMADGPM PEHYEPWESP VDNALSGTQN NPAAMVFEGD TKGSAGEYPV ICTTVRTVEH SLGGELTRNM PFLVELAPAA YVEISEQLAS EKGIKAGDIV KLTSARGSVS VAAAVTKRLK PFSIGGKTVH QVAIPYHWGF MGIAQGDSAN TLAPNTADSN SSTPEFKAFL VKVEKEADGT VPTITGRYKV LED
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