Gene DET0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET0117 
Symbol 
ID3230532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand- 
Start bp115191 
End bp115763 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content46% 
IMG OID637119685 
Producttranscriptional regulator, putative 
Protein accessionYP_180867 
Protein GI57235062 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACTCAC ATGATGCCGG CAAAGTAAGT ATGGAAGATA TTGCCCGCAA GGCCAGAGTT 
TCCCCCACTA CCATTTACAA CAATTTCGGG GGCAGAAAAG CTTTGGTACA GGGGGTAGTA 
AAAAAAATAA TAGATGACAA CATTGCTCAG GCAAAAAGCA TTATGGCCGG CTCCCTGCCC 
TTCCCTGACA AAATACAGCT GATACTCTCC AACAAAAATG ATATGGCCGG AAAAATGCCG 
GAAGAGATAC TGAAAAAACT GGTGTACATG GACGATGATG TGGCCGCTCT GATACAGGAA 
ATCTACCAGA AAGAAATTCA GCCCATGTGG CAGAAACTGA TAGCGGACGG CAAAGCCGAA 
GGATACGTAG ACCCGTCCAT CTCCGAAGAA ACCGCCTTTA TTTACCTTAA AATAATGCGT 
GACGGCTTTA ATGCCAACGC CGCCTTATTT GAACCCTCCA AAGACAAAAT AAACCTGATG 
ATGGGGCTTT CCCGGATAAT GATGTACGGC TTTTTCAAAA ACGATGCCTG CCCTATTCCA 
ACCCGCCAAA ATATTCAGGC AAAAACCGGC TGA
 
Protein sequence
MNSHDAGKVS MEDIARKARV SPTTIYNNFG GRKALVQGVV KKIIDDNIAQ AKSIMAGSLP 
FPDKIQLILS NKNDMAGKMP EEILKKLVYM DDDVAALIQE IYQKEIQPMW QKLIADGKAE 
GYVDPSISEE TAFIYLKIMR DGFNANAALF EPSKDKINLM MGLSRIMMYG FFKNDACPIP 
TRQNIQAKTG