| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_4212 |
|---|
| Symbol | |
|---|
| ID | 8393563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 4348451 |
|---|
| End bp | 4349560 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644982124 |
|---|
| Product | type IV pilus assembly protein PilM |
|---|
| Protein accession | YP_003139836 |
|---|
| Protein GI | 257061948 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
|---|
| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.175207 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAATC GGTTAAAAGC TTTATTAGCA GGGAAATCCC CAGGGGTTGG CTTAGAAATC
ACCCCCGAAA GACTGAATTT AGCCCAATTG TCCAAACACA AGCAAGGCTA TAAATTGACC
AAGTTCTGCA CCACAGAAAT TCCCGAAGGG ATCTTTGAGG AGGGAAAAAT TCTCGATTCT
CCCAGATTAG CGGAACTGAT CCAAGAGATG CTCAAAGAGA ATAAAATTAA CACCAAACGG
GTAGCGACGG CTGTTCCCAT GCGCGAAGCC ATTATTCGGG TGATTCCCAT TCCGGCTGAA
CTCGATGACG AGGAATTGCG CGACATGGTG TTAAATACGG AAGCGGCCTT GTATTTGCCC
TATCCGAGAG AAGAAGTCGA TCTCGACTAT CAGAAGCTAG GCTTCTTTGA AGACGAAGAC
GGCATCGAAA AAGTTCAAGT CCTCCTAGTA GCCACCCGTA AAGAGGTAAC AGACTCCTAT
ATGGACACCT TTCAGCAAGC GGGACTGGAA GTGGATGTGC TTGAAATTAA CAGTTTTGCC
TTAATACGGA CAATTAGGGA ACAATTGAGG CAATTTAGTT CAAAAGAAGC CGCCGTCTTA
GTCGATGTGG AGTTTGACAA TACGGAAATT GCGATCGTCG TCGATGGGGT TCCTCAATTT
TCACGGACGG TTCCCATTGG AACCTACCAG ATGCAAAATG CCCTATCACG GGCGATGAAT
TTACCCCCCT CGCGGAACCC AGAAATTTTG CAGGGGATGA CCATTCCCGT GACTCAGTTT
GACAGCTTGA GTACCCAAGG AACCGCGATC AACCCAGGGA TGACTGCCCT GATGAGAGTC
TTAGGAGAAC TCACCGACGA ATTGAGGCGA TCAATCAATT TTTATTTAAA CCAAAGTGAA
GAGTTGGAGG TCGTACAAAT GTTGTTAGCA GGTCCTGGAG GAGGACTGGT ACAACTCGAT
GAATATTTGA CCCATCGCTT AAGTATTCCT ACCATGCAAG TTGATCCAGT AACCACCTTA
GCCTTAGAAC TTGACAAAGA CATTCCGGCA GTTCAACGGC CAGGGTTAGG AACAGTATTA
GGGTTAGGGT TACGGGAGGT TAAAGCCTAA
|
|---|
| Protein sequence | MLNRLKALLA GKSPGVGLEI TPERLNLAQL SKHKQGYKLT KFCTTEIPEG IFEEGKILDS
PRLAELIQEM LKENKINTKR VATAVPMREA IIRVIPIPAE LDDEELRDMV LNTEAALYLP
YPREEVDLDY QKLGFFEDED GIEKVQVLLV ATRKEVTDSY MDTFQQAGLE VDVLEINSFA
LIRTIREQLR QFSSKEAAVL VDVEFDNTEI AIVVDGVPQF SRTVPIGTYQ MQNALSRAMN
LPPSRNPEIL QGMTIPVTQF DSLSTQGTAI NPGMTALMRV LGELTDELRR SINFYLNQSE
ELEVVQMLLA GPGGGLVQLD EYLTHRLSIP TMQVDPVTTL ALELDKDIPA VQRPGLGTVL
GLGLREVKA
|
|---|
| |