| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3818 |
|---|
| Symbol | murD |
|---|
| ID | 8393168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 3932027 |
|---|
| End bp | 3933397 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644981743 |
|---|
| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
|---|
| Protein accession | YP_003139457 |
|---|
| Protein GI | 257061569 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
|---|
| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.766352 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACTG CTTATATTAT TGGACTAGGA AGATCGGGTA TTGCGGCTGC TAGACTGTTA
AAAATCCAGG GATGGGAGGT AATTTTAAGT GATCGCGCCC ATTCTCCCAA TTTAGAGATA
ACACAACAAG AATTAGGACA AGAAGGAATT ACGGTTAAAT TAGCCGATCA TCCCAGTTTG
ATTGATTCAA ACTTACCTAA TTTAATTGTA GTCAGCCCTG GGGTTCCTTG GGATGTGAAT
TTTTTGCAAG AAGCCCGCGA TCGCGGTATT GACGTGATTG GAGAGTTAGA ATTAGCGTGG
CGATCTCTAC AATCATCCCC GTGGGTAGGC ATTACAGGAA CCAACGGAAA AACCACCACC
ACTGCCCTTG TTGCAGCCAT TTTTCAAGCA TCAGGACTGA ATGCTCCTTC CTGCGGTAAT
ATTGGCTATG CAGCCTGTGA ATTAGCCCTC TCTCAAACAA AAACCAAGGC TTCTTCCTTT
GATTGGATTA TTGCTGAAGT CAGTAGCTAT CAAATCGAGT CATCCCGTGA ACTAGCCCCA
AAAATTGGCA TTTGGACAAC GTTTACTCCC GATCACCTCA GTCGTCACAA AACCCTAGAC
AACTACTACG CCATTAAAGC GTCTCTACTG CGCCGTTGTG AACTACAAAT TTTTAATGGG
GATGATCCCT ACTTACACCA AGTGGGGTTA CATCAGTGGG CAGATGCCTA TTGGACGACG
GTTAAAGGAA AAGAGCATTT ACTGTGTGAT GCTGCAAAAG GAGTCTATCT TCAAGATAAC
TGGATTGTTG CCTTTGGGGA ATTAATTGCG CCTCTCAATT TGTTTAAAAT GGTGGGGGTT
CATAATCAAC AAAACCTCTT AATGGCGGTT GGGGCGGCGA GATTAGCCGG AATAGAAAAA
GGGGCGATCG CTCAAGCTAT TGCTACTTTT AAAGGCGTTC CTCACCGTTT AGAATTGATT
ACAAATATTG ACGGAATTGA CTTTATCAAT GATAGCAAAG CCACTAATTA TGATGCCGCC
GAAGTGGGGT TAGTGTCTGT GAATGCCTCT GTTATTTTAA TTGCAGGAGG AGAAGCCAAA
GAAGGCGATG ATCGTCGCTG GATTGAGCAA ATTAAAGCCA AAGTGGCTAC GGTATTATTA
ATTGGGGAAG CAGCCACGGC TTTTGCTCAA CGCTTACAAC AATCAAACTA CGAAGCTTAC
GAAATTGTCG AAACAATGGA TAATGCTGTT AAACGAGGTT TAGAATTAGC CAAAAAACAA
CAAGCCAAAG TGGTTTTATT GTCCCCTGCT TGTGCCAGTT TTGATCAATA TCAAAGCTTT
GAACATCGCG GAGATCATTT TCGTCAACTC TGTCAAGCAT TGAAGGAATA A
|
|---|
| Protein sequence | MATAYIIGLG RSGIAAARLL KIQGWEVILS DRAHSPNLEI TQQELGQEGI TVKLADHPSL
IDSNLPNLIV VSPGVPWDVN FLQEARDRGI DVIGELELAW RSLQSSPWVG ITGTNGKTTT
TALVAAIFQA SGLNAPSCGN IGYAACELAL SQTKTKASSF DWIIAEVSSY QIESSRELAP
KIGIWTTFTP DHLSRHKTLD NYYAIKASLL RRCELQIFNG DDPYLHQVGL HQWADAYWTT
VKGKEHLLCD AAKGVYLQDN WIVAFGELIA PLNLFKMVGV HNQQNLLMAV GAARLAGIEK
GAIAQAIATF KGVPHRLELI TNIDGIDFIN DSKATNYDAA EVGLVSVNAS VILIAGGEAK
EGDDRRWIEQ IKAKVATVLL IGEAATAFAQ RLQQSNYEAY EIVETMDNAV KRGLELAKKQ
QAKVVLLSPA CASFDQYQSF EHRGDHFRQL CQALKE
|
|---|
| |