Gene Cyan8802_3810 details

Gene Information

• Locus tag: Cyan8802_3810
• Symbol: leuD
• ID: 8393160
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8802
• Kingdom: Bacteria
• Replicon accession: NC_013161
• Strand: +
• Start bp: 3924658
• End bp: 3925251
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 644981735
• Product: isopropylmalate isomerase small subunit
• Protein accession: YP_003139449
• Protein GI: 257061561
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCCAAG TACAAACGAT TTCAGGATCA GGTATTCCCT TGATAGGGGA TGATATTGAT 
ACCGATCGCA TCATTCCCGC GCGGTTTTTA CGCTGTGTCA CCTTCGACGG GTTAGGGGAA 
CAGGTTTTTG CTGATGATCG TGCCCAATTA AAAGGGCAAC ACCCCTTTGA TCAACCCCAA 
TACCAGGGAG CCAAAATCTT AGTTGTTAAC GCTAATTTTG GCTGTGGTTC ATCGCGGGAG 
CACGCGCCTC AAGCCATTAT ACGGTGGGGG ATTCAAGCCA TTGTCGGGGA AAGTTTTGCC 
GAAATCTTTT TGGGAAATTG TATCGCCAAT GGGGTTCCCT GTGTGACAGC CCAACCCGAA 
GCGATTAAGG AATTGCAAGC TTTAGTCCAA GGGAATCCTC AACAAGAGAT TACCCTAGAT 
TTAGCCACCC TAACCATCCA TTGTGGTGAG TGGGTCGCTC CGATTACCAT CGGAGAAGGA 
TCACGACAAA TGTTGCTCAG GGGAACGTGG GATAGCTGCG GACAACTGAT CCAAAATATC 
GACCAAATTC GCCAAACAGC CAGTAAATTA ACCTATCTGT CATGGAGTGC TTAG 

 

Protein sequence

MSQVQTISGS GIPLIGDDID TDRIIPARFL RCVTFDGLGE QVFADDRAQL KGQHPFDQPQ 
YQGAKILVVN ANFGCGSSRE HAPQAIIRWG IQAIVGESFA EIFLGNCIAN GVPCVTAQPE 
AIKELQALVQ GNPQQEITLD LATLTIHCGE WVAPITIGEG SRQMLLRGTW DSCGQLIQNI 
DQIRQTASKL TYLSWSA