| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3502 |
|---|
| Symbol | |
|---|
| ID | 8392841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | + |
|---|
| Start bp | 3569684 |
|---|
| End bp | 3571003 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644981436 |
|---|
| Product | type III effector Hrp-dependent outers |
|---|
| Protein accession | YP_003139160 |
|---|
| Protein GI | 257061272 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.780183 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.151164 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAA CCCCTAAAAT TATTGTCCTT GATGACGATC CTACAGGTTC TCAAACGGTA
CACAGTTGTT TATTGTTGAT GCGGTGGGAT GTGGAAACCC TTCGGTTAGG TTTAGCAGAT
GAGGTTCCTA TTATCTTTAT TTTAACGAAT ACGAGAGCCC TAACCTCCGA AAATGCAGCT
AGTGTTACCC AAGAAGTCTG TCATAATCTG AAAATAGCCA TTGAAGCAGA AGGAATTAAA
GATTTTTTAG TTGTTAGTCG TTCTGACTCT ACCTTACGGG GACATTATCC CATCGAAACC
GATGTCATTG CTGAGGAATT AGGAGGGTTT GATGCTCATT TTCTCATCCC GGCTTTTTTT
GAAGGAGGAA GACAAACCAT TGGGAGTATT CATTATTTAA AAATAGAGGG TAAATTAACC
CCTGTTCATG AGACAGAATT TGCTAAAGAT TCTGTATTTG GCTATCATCA TAGTTATCTT
CCTGATTATG TAGAAGAAAA GACTCAAGGA CGCATTAAAG CAACCGAAGT TGAGCGATTT
TTGTTAACAG ATATTCGTCA GGGAAGTTTA GATCGGTTAA TGCAATTAAA GGGGAATCAA
TGCGCGGTTG TTGATGGAGA AATTCAAGCA GATTTAGATC GGTTTTCTCA AGATTTATTA
ACCGCAGCAG CAGCAGGAAA GCGGTTTTTA TTCCGTAGTG CTGCGAGTAT CTTAACCTCT
TTAGCGAATT TAAGACCCCA ACCCATTGCA CCCGAAGAAA TGGCGAAATA TAAACCAACT
GCTAACCCTG GAGTAGTTAT TGTTGGTTCT CATGTCAAAA AAAGCACTCG ACAATTGCAA
GAACTGCTCA AAGAATCGGA TGTAGTTGGT ATTGAAGTTG AGGTTAAAAG ATTGCGAGAT
CATCCTCAGC AAAAAGAGCA ATTATTACAA GAAATTTTAG AGCGAGTTAA ACAGGTTTAT
TCTGAAACTA AAACTCCAGT AGTGTATACC AGTCGAGAAG AATTGACTTT TGAAACGATA
CAACAACGCT TAGATTTTGG GATTGCTGTC TCTAGTTTAT TAATGGAAAT TGTTCAAGGA
TTACCCCGCG ATATCGGGTT TTTAATCAGT AAGGGGGGAA TTACCTCTAA TGATGTGCTG
AGTACGGGTT TAAACCTGCG ATCGGTGCGT TTGTTAGGTC AAGTTTTAGC GGGATGTTCG
ATGGTTATAA CAGAAAACAA TCATCCTTTA TTTGCTAATT TACCCGTGGT TTTATTTCCA
GGTAATGTCG GCAATGATCA AGGATTAGTC ACTGTTTATC GTCGTTTAAA AGGATCTTAA
|
|---|
| Protein sequence | MNQTPKIIVL DDDPTGSQTV HSCLLLMRWD VETLRLGLAD EVPIIFILTN TRALTSENAA
SVTQEVCHNL KIAIEAEGIK DFLVVSRSDS TLRGHYPIET DVIAEELGGF DAHFLIPAFF
EGGRQTIGSI HYLKIEGKLT PVHETEFAKD SVFGYHHSYL PDYVEEKTQG RIKATEVERF
LLTDIRQGSL DRLMQLKGNQ CAVVDGEIQA DLDRFSQDLL TAAAAGKRFL FRSAASILTS
LANLRPQPIA PEEMAKYKPT ANPGVVIVGS HVKKSTRQLQ ELLKESDVVG IEVEVKRLRD
HPQQKEQLLQ EILERVKQVY SETKTPVVYT SREELTFETI QQRLDFGIAV SSLLMEIVQG
LPRDIGFLIS KGGITSNDVL STGLNLRSVR LLGQVLAGCS MVITENNHPL FANLPVVLFP
GNVGNDQGLV TVYRRLKGS
|
|---|
| |