Gene Cyan8802_3270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan8802_3270 
Symbol 
ID8392606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8802 
KingdomBacteria 
Replicon accessionNC_013161 
Strand
Start bp3342825 
End bp3343565 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content43% 
IMG OID644981217 
Productpeptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 
Protein accessionYP_003138943 
Protein GI257061055 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1876] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.885024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGACA TTCCAGAGGC ATTAAGAGAA GCTTCAACCT CCAATCCGAT GTCGCGTCAG 
ACATCAGGAT TATTGATGGT GGGAGGATTA AGCATAGGAG TCCTAATCGT CATAGGAGGA
CTGGTTTTAA TGCGTCCTGG TTCCCAACCT GTCCCGACAA CTCCTGCAAC AACAACCCCA
GAACCTGTCT CAAGTCCTTC TCCTGAACCT GTAGACAATA TTTTGGGACA TTTACCCTAT
AAAGAGGCTT CTTTATCCCA ATTAAAAGCC ATTACCCCCG ATGGACGCAT TAAATTGCGC
TTAACTGCTG CGGATGAGTT TCTCAAAATG CAAGCCGCCG CGCGATCGCA AGGAGTGATT
TTAGCTCCAA TTTCGGGATT TAGGACAGTT AACGAGCAAA ATTACTTATT TTTTGAAGTT
CAACGACAAC GCAATCAAAA TCCCAGCAAA CGAGCCGAAG TGAGTGCGCC TCCTAACTAT
AGCGAACACC ATACAGGGTA TGCTATTGAT ATTGGCGATG GTAAAGCTCC AGGAACTAAT
CTTACTCCAA GTTTTGAGAA CACGGCTGCC TTTAATTGGT TACGCAATAA TGCAGCTAAA
TACAGTTTTG AGCTATCCTT TCCCCCGAAT AACCCCCAAG GAATTAGTTA TGAACCGTGG
CACTGGCGAT ATGTGGGAGA TCAAGATAGT TTAGAAACAT TTTATAAAGC AAGAAACTTA
CAACAAAAAC CTTCAAACTA A
 
Protein sequence
MDDIPEALRE ASTSNPMSRQ TSGLLMVGGL SIGVLIVIGG LVLMRPGSQP VPTTPATTTP 
EPVSSPSPEP VDNILGHLPY KEASLSQLKA ITPDGRIKLR LTAADEFLKM QAAARSQGVI
LAPISGFRTV NEQNYLFFEV QRQRNQNPSK RAEVSAPPNY SEHHTGYAID IGDGKAPGTN
LTPSFENTAA FNWLRNNAAK YSFELSFPPN NPQGISYEPW HWRYVGDQDS LETFYKARNL
QQKPSN