| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_3178 |
|---|
| Symbol | |
|---|
| ID | 8392511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 3251844 |
|---|
| End bp | 3252746 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644981123 |
|---|
| Product | modification methylase, HemK family |
|---|
| Protein accession | YP_003138852 |
|---|
| Protein GI | 257060964 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2890] Methylase of polypeptide chain release factors |
|---|
| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.650467 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAATTG TCAATGTATC AGGTCAAGAA CTAGCTAAGT GGCGAAATTG GGCAAAAACA
GAAGCAGTCA ACTATCACGT TCCTTCTCAA GAAGTTGACT GGTTATTGCA AGACGTAGCT
CAACTAGATG CCCTTTCTTT GCGCTTAGAA TCGTTTGAAG GGCGATCGCC AATTCCTCTG
AAATTCTCCC TTTCTGACTT AACCCAATTG TGGGAAAATC GCTTAAAAGA TCGCGTCCCG
GTGCAATATT TAGTGGGAGT TACCCCTTGG CGTAATTTTT CCTTGAAAGT TTCACCTTCA
GTCCTCATTC CTCGTCCTGA AACAGAACTG ATCATTGATT TTGCCGTCAA AGCCGTAAAA
GACAGTCCAA GAAATGACTT AGCATTAGGC CATTGGGTAG ATCTAGGGAC GGGCAGTGGC
GCGATCGCCT GTGGACTCGC TCAGGCCTTT CCCAAAGCCA TCATCCATGC CGTAGACTCT
AGTGAGGCAG CTTTAGTCAT TGCTCAAGAA AATGCTAATA ACTTAGGGTT TTCCTCAAGA
ATTAATTTCT ATCAGGGGTC CTGGTGGACT CCTCTAGAAA GTTTAAAAGG AAAAATTAGT
GGAGTCCTGT CTAACCCTCC CTATATTCCC ACAAAAATGT TGTCTGAATT AGCTCCAGAA
GTTAGGGATC ATGAGCCCTA TTTAGCTTTA GATGGAGGAG AAGATGGTTT AGATTCTCTG
CGTTATTTGA TCAATAGTTC CCCTGATTAT CTCTATTCTG GCGGTATTTG GTTAGTAGAA
ATGATGGCAG GACAAGGGGA AAAAGTAGCT CAATTATTAA CTGATTCTAC TGCTTATAAA
GACATCAAAA TATTATCTGA TTTAGCAGAA ATTGATCGCT TTGCTTTAGC TTATTGTAAC
TAA
|
|---|
| Protein sequence | MGIVNVSGQE LAKWRNWAKT EAVNYHVPSQ EVDWLLQDVA QLDALSLRLE SFEGRSPIPL
KFSLSDLTQL WENRLKDRVP VQYLVGVTPW RNFSLKVSPS VLIPRPETEL IIDFAVKAVK
DSPRNDLALG HWVDLGTGSG AIACGLAQAF PKAIIHAVDS SEAALVIAQE NANNLGFSSR
INFYQGSWWT PLESLKGKIS GVLSNPPYIP TKMLSELAPE VRDHEPYLAL DGGEDGLDSL
RYLINSSPDY LYSGGIWLVE MMAGQGEKVA QLLTDSTAYK DIKILSDLAE IDRFALAYCN
|
|---|
| |