Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_2978 |
Symbol | |
ID | 8392306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 3010751 |
End bp | 3011758 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644980926 |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_003138660 |
Protein GI | 257060772 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.856422 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAT CTGCATCTTT GCCTGATATT TACCTGAGCT TTTTTATGTT CACCACGAAC TTACAACCCG ATAATTTAGC ATATCGGAAA GTCGTCGTTG ATCATATTAA ACAGCTACAA ACCTTTGGTT ATAGTGGGTT TGAATTTCCC ATTGCTCCCA CCTTTGGCAG CGATTTTAGC CAAGATATTC AAAATTATGC CGATTTGCGC CAATATTTAG ACGATCAAGG CTTAAGCGCG GTTAAAATAG CGACTAATGT TGGATGTACC CGAACCTACG ATCCCACTTC TCCCTATCCC GAACAACGAC AAAAAGCCCT AGCCTATCTT AAATCACGGG TAGACATTAC CCACGCTCTA CGGGGGGAAA TTATGATGGG ACCCATCGTT ATCCCCTATG GTGTCTTTCC TACGACCGAT TTTAACGAAC CGATCTGGAG TGATCAACTC CAAGATGAGT TAGCAGTACG GTATCAGACA GCCCAACCCG TACTTAATGA ATTAGGGATC TATGCAGCGC AAAAAAACGT TAAATTAGCC ATTGAACCCA TCACCCACTG GGAAACCCCC GGACCTAATA AACTATCCCA ATTAATGGAC TTTCTCGACG GGGTAGACTG CAAACAGGTA GGAGTCGTCA TCGATAGTGC TCACGAAACC CTAGATGGAG ATGGTCCAGA AATCTTTAAA ACCCAAGTCG CTGAACTCGC GCGACAAGGA CGACTCCATT ATATCCAAGT CTCTCCCCCC GATCGCGGCG CATTGCATAC CAGTTGGATA CCTTGGCAGT CCTTTCTCGA ACCCGTCTTA GATGTGTATA ACGGTCCGAT TGCTGTCGAA ATTTTTAACG CTATTCCCGC TTTTATTGGG TCTTTACGGC TATCTCGGCG CAAATTCTGG ATACCAGGAG AAGATACACC TAATACCTAT CCTAGTGCCT ATGATATCGC CCAGAAAGCG ATCGAAGCAA CCCAACGGGA AATCAACCAG GTTCTTGATC TTGCCTAA
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Protein sequence | MSKSASLPDI YLSFFMFTTN LQPDNLAYRK VVVDHIKQLQ TFGYSGFEFP IAPTFGSDFS QDIQNYADLR QYLDDQGLSA VKIATNVGCT RTYDPTSPYP EQRQKALAYL KSRVDITHAL RGEIMMGPIV IPYGVFPTTD FNEPIWSDQL QDELAVRYQT AQPVLNELGI YAAQKNVKLA IEPITHWETP GPNKLSQLMD FLDGVDCKQV GVVIDSAHET LDGDGPEIFK TQVAELARQG RLHYIQVSPP DRGALHTSWI PWQSFLEPVL DVYNGPIAVE IFNAIPAFIG SLRLSRRKFW IPGEDTPNTY PSAYDIAQKA IEATQREINQ VLDLA
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