| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan8802_2908 |
|---|
| Symbol | |
|---|
| ID | 8392235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8802 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013161 |
|---|
| Strand | - |
|---|
| Start bp | 2942476 |
|---|
| End bp | 2943438 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644980856 |
|---|
| Product | NADH ubiquinone oxidoreductase 20 kDa subunit |
|---|
| Protein accession | YP_003138591 |
|---|
| Protein GI | 257060703 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
|---|
| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAATG TTCTTTGGCT ACAAGGTGGT GCTTGCAGTG GGAATACCAT ATCATTCCTG
AATGCAGAAG AGCCCACCAT TGTTGATTTG ATTACGGATT TTGGTATTAA TGTTCTCTGG
CATCCGTCCC TCGGACTGGA ATTGGGAGAC AGCTTACAGC AACTCCTAAG AGACTGTGTT
AGTGGCAAAA TTGCCGTTGA TATCCTGGTT TTTGAAGGAA GTGTGGTTAA TGCACCCCAT
GGAACCGGAG AATGGAATCG GTTTGCTGGC CGTCCCATGA AAGACTGGTT AGCGGACTTA
TCCAAAATTG CCGGGTTCGT TGTGGCTGTA GGAGACTGTG CCACCTACGG GGGTATTCCA
GCGATGGAAC CTAACCCCAG TGAGTCCATT GGAGTACAAT TTCTTAAACG CAAAGAAGGA
GGCTTTTTAG GGGCAGATTA CCGTTCCCAA GCGGGACTCC CTGTCATTAA TATACCCGGT
TGTCCGGCGC ATCCTGACTG GATTAGTCAA ATTTTAGTCG CGGTAGCTAC GGGACGGGTA
GGAGACATCA CCCTTGATGA GTTTCACCGT CCTGAAACCT TCTTCAAGTC CTTTACCCAG
ACGGGTTGTA CTCGCAATAT GCACTTTAGC TATAAAGCGA CAACTCAGGA CTTTGGACAG
CGTACGGGAT GTCTCTTCTA TGATATGGGC TGTCGTGGTC CGATGACCCA TTCTTCGTGT
AATAGAATCC TCTGGAACCG AGTTTCGTCC AAAACTCGCG CGGGAATGCC CTGTTTAGGC
TGTACTGAAC CGGAATTTCC CTTCCATGAT CTTAAGCCAG GAACTGTCTT TAAGACCCAA
ACGGTGATGG GTGTTCCTAA AGAATTACCC CCAGGGGTCA ACAAAAAAGA TTATGCCTTA
TTAACGGTTG TTGCTAAAGA TGCCAGTCCA TCTTGGACAA ACGATGATAT GTTCACCGTC
TAA
|
|---|
| Protein sequence | MANVLWLQGG ACSGNTISFL NAEEPTIVDL ITDFGINVLW HPSLGLELGD SLQQLLRDCV
SGKIAVDILV FEGSVVNAPH GTGEWNRFAG RPMKDWLADL SKIAGFVVAV GDCATYGGIP
AMEPNPSESI GVQFLKRKEG GFLGADYRSQ AGLPVINIPG CPAHPDWISQ ILVAVATGRV
GDITLDEFHR PETFFKSFTQ TGCTRNMHFS YKATTQDFGQ RTGCLFYDMG CRGPMTHSSC
NRILWNRVSS KTRAGMPCLG CTEPEFPFHD LKPGTVFKTQ TVMGVPKELP PGVNKKDYAL
LTVVAKDASP SWTNDDMFTV
|
|---|
| |