Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan8802_0243 |
Symbol | rpsC |
ID | 8389547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8802 |
Kingdom | Bacteria |
Replicon accession | NC_013161 |
Strand | - |
Start bp | 228613 |
End bp | 229338 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644978289 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_003136047 |
Protein GI | 257058159 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACAAA AGATACATCC AATCGGGTTT CGACTCGGTA TTACCGCAGA CCATAAATCT TGCTGGTACG CCGACAGCAA ACGCTATCCC GAAACCTTGC AAGAAGATCG CCAAATTCGA CAGTATATTA CCAAGAATCT TAGCAATGCC GGAATTTCCG ATATTCGGAT CGAACGCAAA GCCGATCAGG TTGACCTAGC CATCCATACT GCCCGACCTG GGGTAGTCGT GGGTCGAGGC GGCAGTGGCA TCGAGCAATT ACGCCTCGGT TTACAGCAGG ATTTAGGCGG AAACCGCCAA ATTCGCATTA ATGTCATCGA AGTCCAGCGT GTTGATGCCG ATGCCATGTT AATTGCCGAA TACATCACCC AACAACTTGA AAGACGGGTT TCCTTCCGTC GCGTTGTTCG CCAAGCCATT CAACGGGCTC AACGGGCAGA AGTTAAGGGG ATCAAAATTC AAGTCAGTGG TCGTCTCAAC GGGGCTGAAA TTGCACGGAC AGAATGGGTT AGAGAAGGAC GAGTTCCCCT CCATACCCTA CGCGCCGATA TTGACTATGC CTACCGTACG GCTCAAACCA TTTACGGGAT TTTAGGCGTG AAAGTCTGGG TTTTCAAGGG AGAAATTATT CCTGGGCAAG AAGAAATTCC CATGCCCGTA CCCAGTCAAA CCCCTCGCCG TCAACGTCGT CGCCAGCAAT TTGAAGATCG ATCAGGCGAA GAATAA
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Protein sequence | MGQKIHPIGF RLGITADHKS CWYADSKRYP ETLQEDRQIR QYITKNLSNA GISDIRIERK ADQVDLAIHT ARPGVVVGRG GSGIEQLRLG LQQDLGGNRQ IRINVIEVQR VDADAMLIAE YITQQLERRV SFRRVVRQAI QRAQRAEVKG IKIQVSGRLN GAEIARTEWV REGRVPLHTL RADIDYAYRT AQTIYGILGV KVWVFKGEII PGQEEIPMPV PSQTPRRQRR RQQFEDRSGE E
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