Gene Cyan7425_5190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_5190 
Symbol 
ID7291144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp5290546 
End bp5291091 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content51% 
IMG OID643588147 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_002485844 
Protein GI220910533 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.360831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTTA CCGAAACTGC CCTGAAAGGA GCTTTTATTA TTGACGTGGA GCAACGCTGG 
GACGATCGCG GCTTTTTTGC CCGTACCTAC TGTGCCCAGG AATTCCTCGA ACAGGGTCTC
AAGCCAACCA TTGCTCAAAC CAATATTTCT TATAACTATC AAAAAGGAAC CCTGCGGGGT
ATGCACTATC AGACCAGCCC GGCAACGGAA GTCAAAGTAG TGCGCTGCAC CTGGGGAGCT
ATTTACGATG TGATTATTGA TATGCGGCCG GACTCCCCCA CCTATCTGTC CCATATTGGG
GTGGAGCTAA CTGCCGAAAA TCATCGCGCC CTTTACATTC CAGAAATGTT TGCCCATGGC
TATCAAACTC TGACGGACGA TGCCGAGGTC AGCTATCTGG TCAGTGAGTT CTATGCACCG
GGCTATGAAC GGGGAGTCCG TTACGACGAT CCAGCCATCG GCATTGCCTG GCCCCTTCCC
GTCAAGGTTA TTTCGGATAA AGATGCCCAT TGGCCTTTGC TGCAGCAACC TACTCTGACG
GTCTAA
 
Protein sequence
MIFTETALKG AFIIDVEQRW DDRGFFARTY CAQEFLEQGL KPTIAQTNIS YNYQKGTLRG 
MHYQTSPATE VKVVRCTWGA IYDVIIDMRP DSPTYLSHIG VELTAENHRA LYIPEMFAHG
YQTLTDDAEV SYLVSEFYAP GYERGVRYDD PAIGIAWPLP VKVISDKDAH WPLLQQPTLT
V