| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_4223 |
|---|
| Symbol | |
|---|
| ID | 7290174 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 4280079 |
|---|
| End bp | 4281485 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643587196 |
|---|
| Product | folate/biopterin transporter |
|---|
| Protein accession | YP_002484897 |
|---|
| Protein GI | 220909586 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | [TIGR00788] folate/biopterin transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0325732 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAGGC AAGCTGAATG GAAATCGCTG CTCAAGCGCG CCCTCTTTGA TCAAGAGCCC
AGTGCCGAAC TGCTGGCTAT TTTGATCGTA TATTTTGTCC AGGGTGTGCT GGGACTGGCC
CGGCTGGCGA TCAGTTTCTT TTTCAAAGAT GAGTTAGGTT TGAGTCCAGC CCAGGTGGCG
GCCCTGATGG GAATTGCGGC GGTTCCCTGG GTGGTCAAAC CCCTGTTTGG GTTTCTCTCC
GACAGTCTGC CGTTGCTGGG TTATCGTCGT CGCTCCTACC TGGTGCTGGC GGGATTGTTG
GGCACCGCTG CCTGGATTGC CCTAGCGGCC TTTGTACACA CGGCGATGGC GGCCACGATT
GCGATCACGA TCGGCTCCCT GGCCATTGCT ATCAGTGATG TAATTGTGGA TTCCCTCGTG
GTGGAGCGGG CCCGCAAAGA GTCTCAGAGC GATGCGGGTT CCTTACAATC CCTCTGCTGG
GGTGCAACTG CTGTGGGGGG GCTGCTCACC GCTTACCTGA GTGGTTTTCT GCTCGAGCAT
TTCAGTACCC ATACCATCTT TGCGATCACC GCCACGTTCC CTTTGCTCGT TTCTGCGGTG
GCGGGGTTGA TCGGTGAAGA AAAGGTTAGT CAGGGAGCGG ATCTCACTGC CCTGCGCCAT
CAAGTGGGTC AGATGCGTCA GGCCCTGGCT GAAAAAGCGG TCTGGTTACC CGTGGCGTTC
CTCTTCCTCT GGCAGGCTAC TCCCAGTTCA GATGCAGCCT TTTTCTTCTT CACGACGAAT
GAACTGGGGT TTGAGCCAGA ATTTCTGGGG CGAGTGCGGT TGGTAACCAG TGTGGCGGCT
CTGGTGGGGG TCTGGATCTT TCAGCGATTT CTCCGCAGTA TTCCGGTGCG GCAAATTTTT
CTCTGGAGTA CCTTGCTTTC TGCCTTGCTG GGGATGACCA CTCTGATTCT GGTTACCCAT
GCCAATCGCA GTTTGGGGAT TGACGATCGC TGGTTTAGCC TGGGGGATAG CTTAATCCTG
ACCGTGATGG GACAGATTGC CTATATGCCC GTCCTGGTTT TAGCTGCTCG CCTCTGCCCC
CCCGGCATTG AAGCGACGGT CTTTGCCCTT TTGATGTCGA TCACGAACCT TGCCGGACTG
CTCTCCCACG AAACCGGGGC GCTGCTGATG CATAGTCTGG GCATTCGGGA AAATCAGTTT
GACCTGCTCT GGTTACTGGT GCTGATCACC AACCTGAGTA CCCTGCTCCC GCTCCCCCTC
TTACACTGGC TCCCCCCAGC AGAATCGACC CTGACTGGCC CCAGTGATGG GAGTGACCAC
GATCGGGGCA AAGGCTCTGA ATTCACCTAT CCTGCCCGAT CTGCCAGCAG CTCAATTACC
GAAACCCAAG AAATCGTTCA TCCCTGA
|
|---|
| Protein sequence | MQRQAEWKSL LKRALFDQEP SAELLAILIV YFVQGVLGLA RLAISFFFKD ELGLSPAQVA
ALMGIAAVPW VVKPLFGFLS DSLPLLGYRR RSYLVLAGLL GTAAWIALAA FVHTAMAATI
AITIGSLAIA ISDVIVDSLV VERARKESQS DAGSLQSLCW GATAVGGLLT AYLSGFLLEH
FSTHTIFAIT ATFPLLVSAV AGLIGEEKVS QGADLTALRH QVGQMRQALA EKAVWLPVAF
LFLWQATPSS DAAFFFFTTN ELGFEPEFLG RVRLVTSVAA LVGVWIFQRF LRSIPVRQIF
LWSTLLSALL GMTTLILVTH ANRSLGIDDR WFSLGDSLIL TVMGQIAYMP VLVLAARLCP
PGIEATVFAL LMSITNLAGL LSHETGALLM HSLGIRENQF DLLWLLVLIT NLSTLLPLPL
LHWLPPAEST LTGPSDGSDH DRGKGSEFTY PARSASSSIT ETQEIVHP
|
|---|
| |