Gene Cyan7425_4057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_4057 
Symbol 
ID7290005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp4089283 
End bp4090383 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content51% 
IMG OID643587029 
Productpoly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit 
Protein accessionYP_002484732 
Protein GI220909421 
COG category[I] Lipid transport and metabolism 
COG ID[COG3243] Poly(3-hydroxyalkanoate) synthetase 
TIGRFAM ID[TIGR01836] poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.588207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.251986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCAT TTTTGTTGCA AATACACCTG GAAGAGGCCG CCCATGAATC CGCACAGCTC 
ACCCACAAAC TGGTGAAGGG CATGGAAAAC CTCAGCCAGC TCCGTGAGGA AGACATTGAG
GTGGGGTCCA CTCCCAGGGA GGTGGTTTAC CAGGAGGATA AGGTTAAACT CTATCGATTT
AAAGCTCCAG CTAACCAGGG AAAAACGGTG CAAACACCGA TACTGATGGT CTACGCCCTG
GTGAACCGCC CCTTTATGGT GGACTTACAG GAAGATCGCT CCCTGGTGGC TAATCTGCTC
AAGTTGGGTC TGGATATCTA TCTGATCGAT TGGGGCTATC CCGGCCGGGG CGATCGCTGG
TTGACCCTGG ACGATTACAT CAATGGTTAT CTGAACAATT GCGTCGATTT TATCCGTGCC
AGCCATCAAC TGGACAAGGT GAACCTGCTG GGCATTTGTC AGGGTGGCAC CTTCAGCCTT
TGCTACAGTT CCCTCTATCC GGATAAGGTG AACAATCTGG TCGTGATGGT GGCCCCCGTG
GACTTTCATC AACCCGAAAC CCTGTTGAAT ATGCGCGGTG GTTGCACCCT GGGGGCAGAA
GCGATCGATG TGGATTTGAT GGTGGATGCC CTGGGCAATA TTCCGGGTGA TTTTCTCAAC
CTGGAATTTC TGATGTTAAA ACCGCAGCAG TTGGGCATTC AGAAATACCT GGATGTACCG
GATCTGATGG ACAGCCCGGA AAAACTGCTC AACTTTCTCA GAATGGAAAA GTGGATTTTC
GACAGTCCCG ACCAGGCAGG AGAAACCTAT CGCCAGTTCA TGAAGGACTT TTATCAGGGC
AATAAGCTGA TCAAAAACCA GGTCAAGATT GGGGATCAGC TAGTAAATCT ACTCAATCTG
ACCATGCCGA TTCTTAACCT CTATGCTGAG AAAGACCATC TCGTTCCCCC CGCTTCTTCC
GTGGCTCTAG CCAAGTACAT CGGCACCCAG GATTACACGG CTAAAGGCTT CCCGGTAGGA
CACATCGGTA TGTACGTCAG TGGCAAGGTG CAACAAGATC TGCCCCCGGT GATTGCGGAC
TGGCTCAGGA ACCGGGATTA A
 
Protein sequence
MLPFLLQIHL EEAAHESAQL THKLVKGMEN LSQLREEDIE VGSTPREVVY QEDKVKLYRF 
KAPANQGKTV QTPILMVYAL VNRPFMVDLQ EDRSLVANLL KLGLDIYLID WGYPGRGDRW
LTLDDYINGY LNNCVDFIRA SHQLDKVNLL GICQGGTFSL CYSSLYPDKV NNLVVMVAPV
DFHQPETLLN MRGGCTLGAE AIDVDLMVDA LGNIPGDFLN LEFLMLKPQQ LGIQKYLDVP
DLMDSPEKLL NFLRMEKWIF DSPDQAGETY RQFMKDFYQG NKLIKNQVKI GDQLVNLLNL
TMPILNLYAE KDHLVPPASS VALAKYIGTQ DYTAKGFPVG HIGMYVSGKV QQDLPPVIAD
WLRNRD