| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_3954 |
|---|
| Symbol | |
|---|
| ID | 7289900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 3978277 |
|---|
| End bp | 3978897 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643586925 |
|---|
| Product | cupin 2 domain-containing protein |
|---|
| Protein accession | YP_002484630 |
|---|
| Protein GI | 220909319 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5553] Predicted metal-dependent enzyme of the double-stranded beta helix superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.219855 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGCGC GGGATTGGTT GGTCAATGAT CAGGGAGAAT GCCAGCCCCG TCCCTCCCCT
AGAGATTGGG ATTTAATCCG CGATCGCTAC TATTTCCATC GTTTTCTGAC TGAGATCATC
GATCTGCTGG AGCAGGTACG TGAAGAAACA GAACAATGGG ATCACCTGCC CCAGATTCGT
TTAGCGGTGC GCCAACTGAT CACCAACTCC TACTGGCTGC AAACCCAATG GCGTGAACCA
GACCCCAAAA CCGGAATTGG CTTGCTGCTC CTCTACGATG AAATTGGCTA TCCCCTTACC
GTACAGACGG TCACTGCTGC CCCCGGTGTG GTTTCCCCCA TTCATAACCA CGGCACCTGG
GGAATTGTAG CTGTTTTGCA GGGACAGGAA AAACATACGT TCTGGCGTCG GGTGCCTCAG
CCTCAGTTTC CCGATCGGAT TGAGCCGCTC AGCAGCCAAA TTTTCCAATC CGGTGAAATT
GTGAGTTTTA CCCCTGCCGC AATTCATCAG GTGGAAGCGA TCGGCGATCG GCCAACCGTC
AGCTTCAATC TCTATGGCGA TACACAGCCC CGCTCTCGGT TTGAATTTGA ACCCACAACC
CACCGAGCCA AACTGTTTTA A
|
|---|
| Protein sequence | MAARDWLVND QGECQPRPSP RDWDLIRDRY YFHRFLTEII DLLEQVREET EQWDHLPQIR
LAVRQLITNS YWLQTQWREP DPKTGIGLLL LYDEIGYPLT VQTVTAAPGV VSPIHNHGTW
GIVAVLQGQE KHTFWRRVPQ PQFPDRIEPL SSQIFQSGEI VSFTPAAIHQ VEAIGDRPTV
SFNLYGDTQP RSRFEFEPTT HRAKLF
|
|---|
| |