| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_3181 |
|---|
| Symbol | |
|---|
| ID | 7289117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 3151799 |
|---|
| End bp | 3152563 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643586157 |
|---|
| Product | Tetratricopeptide TPR_2 repeat protein |
|---|
| Protein accession | YP_002483870 |
|---|
| Protein GI | 220908559 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3063] Tfp pilus assembly protein PilF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.385251 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTAATCA AGACTGGATT TGTGTTAAGC CGTTTGCCCA GCAGTTTACT GGCGATCGCC
CTGGCCAGTT GCCAACCCAC GGCCGAGATT CAAACAACTC CCCCCGCTCG TTCTCCCCTT
GCAGCGCCAA CCAGCCCTAC CCCCTCAGCT GCAGATATTA CCCAGGCCAG TCGGTATCGG
CAGGAGGGTT TGTCTGCTCG GCAACAGGGT AATTTTCCCC AGGCGATCGC GGCTCTGGAA
AAATCTGTCC AGCTTGATCC CACCCACCTT TCTGGTTATG TGATTCTGGG GTGGACTCAA
CATCTCGCCG GTCAGGCCAC AGCTGCAACT ACCACTCTAC AAACGGCATT ACAACGCGAT
CCGAACCATG TTCCCGCTCT GAATGCGCTG GGCATCGTTT ACCTGGTCAA TGGTCAGTTA
GAACAAGCGG TTGCCACCCA TACCCAGGCC GCCCAACTGC AACCGAATAA TGAAATTGCC
TATTACAATC TCAGTCTGGC CTATCAACGC TTGCAACAAT ACGGGCGGGC GATCGAGACT
GCAATCAAAG CCACCCAACT GGAACCGGAA AATCCCCATC CCTGGGTGGC CCTGGCGATC
GCCCACTGGA GTAAAGGGGA TAGAAGTTCA GCCCAAACCG CCTATACCCG CGCCATCGAG
CTGGATAGTG GATATGGCGA TCACGCTTAT CTATCCCACT TAAAAGAGGC AGGATTTAGC
CCCGATCAGA TTCAACTCAC TGAACAGGTT TTGCGGGCGG ATTAA
|
|---|
| Protein sequence | MLIKTGFVLS RLPSSLLAIA LASCQPTAEI QTTPPARSPL AAPTSPTPSA ADITQASRYR
QEGLSARQQG NFPQAIAALE KSVQLDPTHL SGYVILGWTQ HLAGQATAAT TTLQTALQRD
PNHVPALNAL GIVYLVNGQL EQAVATHTQA AQLQPNNEIA YYNLSLAYQR LQQYGRAIET
AIKATQLEPE NPHPWVALAI AHWSKGDRSS AQTAYTRAIE LDSGYGDHAY LSHLKEAGFS
PDQIQLTEQV LRAD
|
|---|
| |