| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_3176 |
|---|
| Symbol | |
|---|
| ID | 7289112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 3146894 |
|---|
| End bp | 3148342 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643586152 |
|---|
| Product | carotene 7,8-desaturase |
|---|
| Protein accession | YP_002483865 |
|---|
| Protein GI | 220908554 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3349] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02732] carotene 7,8-desaturase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTTG CGATCGTTGG GGCCGGACTG GCGGGAATGG CTACCGCTGT GGAACTGGTG
GAACGGGGCC ATGAAGTTAG CCTTTATGAA GCCCGGCCGT TTGTCGGCGG TAAGGTGGGA
AGCTGGATAG ATCCGGCAGG CAACCATATT GAAATGGGTT TGCACGTCTT CTTTGGCAAC
TACTATCAAT TATTTGCTTT GATGCAAAAG GTAGGGGCCT GGGAGCATTT AAGCCTGAAG
GAGCACGTTC ATACCTTTAT TAACCGGGGC GGGGAAACGG GCTGTCTGGA TTTCCGCTTT
CTTGTCGGGG CCCCTTTCAA TGGTTTAAAA GCCTTTTTTA CCACCACCCA GTTATCGCCT
CAAGACAAGC TGCAAAATGC GATCGCCCTG GCTACCAGTC CGGTGGTTCG GGGGTTGGTG
GATTTTGATG GAGCCATGCG GACCATCCGG GCGCTGGACA ATATCAGTTT TGCCGATTGG
TTTCGCAGCC ATGGCGGTTC CCAGGGGAGC TTAAAACGGA TGTGGAATCC GATCGCCTAT
GCTCTGGGCT TTATTGACAC AGAAAATATT TCTGCCCGCT GCATGCTGAC CATTTTTCTG
ATGTTTGCTG CCCGCACCGA AGCCTCTGTT TTGCGCATGC TGGTTGGTTC TCCTCAGGAA
TATCTGCATC AGCCGATCGT GAATTACCTG GAAGCCAGAG GGGCAAAAAT TTATACCCGC
CGTCGCACCC GTGAAATTCT CTACAGTGGT GAAGGCAACC AGACCCAGGT GACCGGACTG
GCGATCGCCC AGGAGGAGGG GGAAGAGATT ATCACCGCCG ATGCCTATGT CTGTGCGGTA
GATGTGCCCG GAATCCAACG GTTGCTTCCC CAGGATTGGC GGCAGTGGCC CCAGTTTGAC
AACATCTATC AGCTGGAAGC GGTTCCGGTG GCGACCGTAC AATTGCGGTT TGACGGTTGG
GTGACTGAAC TGGAAGATGC CAATGCCCGT CACCAGGTTC AGCAGGCCGC CGGGATCGAT
AATTTGCTCT ATACCGCCGA TGCCGACTTT TCCTGCTTTG CCGATCTGGC CCTGACTAGT
CCCAAGGACT ACTACCGCGA CGGGCAGGGA TCGCTGCTGC AGGTGGTGCT GACCCCCGGC
GATCCGTTTA TTAAACAGAA CAACGAAGCG ATCGCTCATC ATGTACTCAA ACAGGTCCAC
GATCTGTTTC CCTCGTCCCG TGACCTGAAC ATGACCTGGT ACAGCGTGGT GAAGCTGGCC
CAGTCCCTCT ATCGGGAAGC CCCCGGCATG GATGTTTACC GTCCCGATCA AAAAACTCCC
ATTCCCAACT TTTTCCTGGC AGGCAGTTAT ACGCAACAGG ACTATATCGA CAGTATGGAA
GGGGCAACCC TTTCGGGGCA GCGGGCGGGA CGGGCCGTGC TAGAGTTCCT GCAGCAGTCA
GGGGGATAA
|
|---|
| Protein sequence | MRVAIVGAGL AGMATAVELV ERGHEVSLYE ARPFVGGKVG SWIDPAGNHI EMGLHVFFGN
YYQLFALMQK VGAWEHLSLK EHVHTFINRG GETGCLDFRF LVGAPFNGLK AFFTTTQLSP
QDKLQNAIAL ATSPVVRGLV DFDGAMRTIR ALDNISFADW FRSHGGSQGS LKRMWNPIAY
ALGFIDTENI SARCMLTIFL MFAARTEASV LRMLVGSPQE YLHQPIVNYL EARGAKIYTR
RRTREILYSG EGNQTQVTGL AIAQEEGEEI ITADAYVCAV DVPGIQRLLP QDWRQWPQFD
NIYQLEAVPV ATVQLRFDGW VTELEDANAR HQVQQAAGID NLLYTADADF SCFADLALTS
PKDYYRDGQG SLLQVVLTPG DPFIKQNNEA IAHHVLKQVH DLFPSSRDLN MTWYSVVKLA
QSLYREAPGM DVYRPDQKTP IPNFFLAGSY TQQDYIDSME GATLSGQRAG RAVLEFLQQS
GG
|
|---|
| |