Gene Cyan7425_2456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_2456 
Symbol 
ID7288386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp2412047 
End bp2414170 
Gene Length2124 bp 
Protein Length707 aa 
Translation table11 
GC content50% 
IMG OID643585451 
ProductCRISPR-associated helicase, Cyano-type 
Protein accessionYP_002483175 
Protein GI220907864 
COG category[R] General function prediction only 
COG ID[COG1203] Predicted helicases 
TIGRFAM ID[TIGR03158] CRISPR-associated helicase, Cyano-type 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.149849 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGTTT TTCTGAAGCC ACTCTATTCC CAGTTGAATC CCGGTATTGG TCACTGTCCC 
CTGGGATGTG AGCAGGTTTG CCAGGTTCAG CAACAGGCTC CCAGTCTCCA GCCTCCCCCT
GGTTATACCT GTCCCCTCTC TATCCACCAG GCTAACACCT GTGCAAAGGT GGTACAGGGA
ACTGCCGATG TCATTTTTAA CAAGGCAGCA ACGGGTGATG GCAAATCCCT AGCTGCCTAT
GCTCCCAGTT TGCTAAATCC CAATGTCAGA ATTATGGGAC TGTACCCGAC GATCGAGCTG
GTGGAAGACC AGACCCGTAG TCAGCAGGGT TGGCATTCTA TGTTTCGGCT GGATGCGGAT
GAGCGGATCG ATCGCCTGTT TGGCGAGGAA TTAAGCCGTC GTGTTCAGGA GGCAGAAACC
AGTAATAAGT TTCAGGAGTT GTTACTGGCA ATTCAGCAGA AGCCCATTCT ATTGACCAAT
CCCGACATCT TCCACCTGAT TACCCACTTC CAGTACCGTG ACCCAGCCTA TGGCAACGAC
CTCCTGCCCC TTGCTCTGGC AGAGTTTCCC GACCTCTGGG TATTCGACGA ATTCCACATC
TTTGGTCCCC ACCAGGAAGC TGCTGTACTT AACAGCATGA CGTTGATTCG ACGGACTCAA
TCGGATCAGC GTCCCCGACG ATTCCTGTTC ACTTCGGCAA CTCCCAAACC AGACTTTATT
AACCAATTAC AGCAGTCCGG GTTGCACACT GTAGAGATTA CAGGCAGCTA TGCCAGTGAA
CCCACACCCG GATTTCGACA GGTTCTACAG CCTGTCGAAC TAGAGTTTGT TAACTTGAAA
GACTCGGATT CTCTAGGGTG GTTGGCTGAA AATGCCAATA TCATCCGAGA CATCTTGCAG
ACAGAATCCC AGGGAAGGGG ACTGGTGATT TTGAACTCGG TGGCTCAGGC AGGACGGGCT
GCCCGATTAC TGGCTGAATT GCTGCCAAAT ATCCTGGTGC GAGAAATCAG CGGACGAATT
GACCGACAAG GCCGATCGGA AACCCAATTA GACCTGAGAA ATTGCCCCCA ACCCGTTCTG
GTCATTGGGA CTTCGGCAGT GGATGTCGGA GTTGATTTCA AGATCCATCT GTTGATTTTT
GAAAGCAGCG ATTCGGCAAC CGTCATTCAG CGGTTAGGCA GGCTGGGACG ACATCCAGGC
TTCTCAAGCT ACCGCGCCTT TGTATTACTG TCGGGACGCG CTCCCTGGGT CATGGCACGG
TTGCAGGAAC GCTTGCAACC AGACCAGCTA ATTGAACGGA GCGAATTACA GGAGGCGATC
GTCGAAGCAT TCGACGCCCC AAAGGAGTTT CAGGAGTACC GCAACCGATG GGGAGCAATC
CAGGCACAGG GAATGCTCTG GAAGATGGGC GAAGGTAATT CAAAAGTGAT GCAACCTGTT
CGCGATCGTA TGGTTGCCGA TCTTCAAAAA GTCTACGGTT CCAGACTAAA GTCGTGGTTG
GGAGACTGGA AAAATTTAGC TAAGACTGAT GTTGGCAAAG AGACACAGCA AGAGTTACTC
CGATTTCGCG GTGGTTCAAC GTTGCAAGCT GCTGTGTGGG ATGGCGATCG CTTTTACACC
TACGATCTGC TTAGGCTATT ACCCTATACC CTGGTTGAAA CGACAACGAG GGAAACTTTT
CTAGAGGCTG CTACTAAGGC AGGATTGGAG AAGGAAGCCT TTCCTAAAAA TTACATTGAG
ATTTATTTGC GAGTGCTGGA ATGGGTAGAT GATCGTTTTA ATATCAGCCT CCACTGTAAC
TGGAATAGTA GCGACCTGAA ATGCTGCGAA CTGACTTTAC TAAATCGCTT AAGCCTGGTG
GGACATCTCC AGTCGGAAGT TGGCAGGTGC TTTTACTCAA AGAAACTCCT GGCATTCCTG
GTTCCTCTTG GTATGCGCCA GTTGCATTGG GAGGTCAGCC GCCACTTAAA ACTTAGTCCC
GTCTTTGGTC TGCATTATCT CATCGATGGT TCCAACAAAC AGGGCTATGC CTGTGCCTTT
AATCAGGATG CTCTACTGCT TGACGCTTTG AAAAGTCGAT TGACTAAATT CTGCCGTTTA
CAACCGCAAT CGTTAATTTT CTAG
 
Protein sequence
MKVFLKPLYS QLNPGIGHCP LGCEQVCQVQ QQAPSLQPPP GYTCPLSIHQ ANTCAKVVQG 
TADVIFNKAA TGDGKSLAAY APSLLNPNVR IMGLYPTIEL VEDQTRSQQG WHSMFRLDAD
ERIDRLFGEE LSRRVQEAET SNKFQELLLA IQQKPILLTN PDIFHLITHF QYRDPAYGND
LLPLALAEFP DLWVFDEFHI FGPHQEAAVL NSMTLIRRTQ SDQRPRRFLF TSATPKPDFI
NQLQQSGLHT VEITGSYASE PTPGFRQVLQ PVELEFVNLK DSDSLGWLAE NANIIRDILQ
TESQGRGLVI LNSVAQAGRA ARLLAELLPN ILVREISGRI DRQGRSETQL DLRNCPQPVL
VIGTSAVDVG VDFKIHLLIF ESSDSATVIQ RLGRLGRHPG FSSYRAFVLL SGRAPWVMAR
LQERLQPDQL IERSELQEAI VEAFDAPKEF QEYRNRWGAI QAQGMLWKMG EGNSKVMQPV
RDRMVADLQK VYGSRLKSWL GDWKNLAKTD VGKETQQELL RFRGGSTLQA AVWDGDRFYT
YDLLRLLPYT LVETTTRETF LEAATKAGLE KEAFPKNYIE IYLRVLEWVD DRFNISLHCN
WNSSDLKCCE LTLLNRLSLV GHLQSEVGRC FYSKKLLAFL VPLGMRQLHW EVSRHLKLSP
VFGLHYLIDG SNKQGYACAF NQDALLLDAL KSRLTKFCRL QPQSLIF