Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_1992 |
Symbol | |
ID | 7287917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | - |
Start bp | 1878351 |
End bp | 1880093 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643584989 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_002482718 |
Protein GI | 220907407 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.491967 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGCCA ACTCTCTACC TCTCCTACAG ATTCTTACCG TTATAGAGTT ACCTATGCCC CAATGTATTC CACCCCTGCC CCAAAACACC TACCGCATTT GTGGAATGTT GCTCAGTCTC CTCCTCTTGG GCCCTGCAGC AAGAGTTCTG GCTCATCCTG GGCACGGGAA TGAGTTTCAA GGGGGTAGCC AAGCCGCTCA ATCCGTCGGA GCTATACAGG TTGATGGAGA CACCGCCCGG CGGCTGGGAC TGAAAGTGGA ACCTATATCC CGGCAACGGC TGGCTTTGGG GATTAAAACT ACAGGAGAAA TTGAGACCTT ACCGGATCGA CAGGCAGAGG TAACCACACC TGTGGGCGGA ACGGTAATTC GCCTGCTAGT GCGTCCGGGG GAGGCGGTGA CGGTAGGACA ACCCGTTGCA ATTATGACCA GCAGCGAGTT GGCTGAACTC CGAACCACAG CTTTGGATCG ACAGGCAGAG GCGATCGCTG CGATTCAACA AGCCCAGGCA GATTTACAGC AAGCCCAGGA AAATTATCGA CAACAGCAGA AGATCGCTAC AACTGACATT CAGCAAGCCC GCACCCAACT GAGTTTTGCC CAAGAACGCT ATGACAAAGA CAAAGAACTG ATGGTTCAGG GCGCAATTCC CCGCCGCCAG TTTTTGGAAT CCGAAACTCA GTTAGCCGCA GCCAGAGCAG CACTTGCTAA AGCGAGCAGC CGTCTCCAGG TGACAGAAGC AGCAGCTCAA CTCAAACGGG CCCAAGCCAA CGTAGATGTA GCCCGATCGC GACTGGCCCT GAGTGGAGAA ACCTATCAGA CTCGTCTGCG CCAACTGGGC ACAACCCCTA ACGCAGATGG CACGATTACG ATTAAAGCAC CCATCTCTGG GATCGTTGCC GATCGGGAAG CCACCACGGG GGAATCGGGA GAGGATGCGG GTAAAAAGAT TTTGACGATC GTCAATAGCA GCAAGGTACA GGTCTCAGCC AATATTTATG AGAAAGACCT GAACCAGATC CAGATAGGGC AGCCTGTACG GGTCAAAGTG AATGGACTGC CTGATCGCAG CTTTGCCGGA CGGATCAGTG TGATTGGGGC GGTGGTTGAG GGACAAAGCC GGGTCGTTCC CGTGCGAGCA GAACTGAGCA ATCCGGATGG CGTTTTGAAA CCAGGGATGT TTGCCGAGTT AGAAATATTA ACGAATCGCA CACCCACTAC AGTTCTTACC ATCCCTAAAT CCGCTCTTAT CGAGACGAAC GATAATAAAA CGATCGTGTT TGTCCAGAAT GGCAATGCCT TCCAGCCCGT TGAGGTTGAG CTAGGCAAAA CATCAGGGGA TTGGGTTGAG ATCCAGAATG GCTTATTTGA GGGCGATCGG GTGGTGACCC AACGGGCCAT GCAACTCTAT GCCCAATCCC TCAGAGGTAA AGCCGAGACA GAAGTGGATC ATGACACTTC AATTTCAACA GCTCCTGCTA ACCAGAACAG ACCGTTACCC TGGTGGATGG TCATTCCAGT CGGGGGGGCA ATGTCCGCTG GCACCTTTTG GGCAGGAATG TATTGGGCGA ACCGTCGGCA TCGCAAAAGG CTCATCCCCC TGAGTGAGGC TAACGGGTCC GGGCTACACC ATCATGCCAA TGGCTCTACT GCCCAACCCA TTGTCCATCC TAGGGCAATC GAGGAGTCTC CCAGACCCAA CCAACCAGAA GCTGAACCCC AATCTCCCCA TCCGCTGCCT TAG
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Protein sequence | MRANSLPLLQ ILTVIELPMP QCIPPLPQNT YRICGMLLSL LLLGPAARVL AHPGHGNEFQ GGSQAAQSVG AIQVDGDTAR RLGLKVEPIS RQRLALGIKT TGEIETLPDR QAEVTTPVGG TVIRLLVRPG EAVTVGQPVA IMTSSELAEL RTTALDRQAE AIAAIQQAQA DLQQAQENYR QQQKIATTDI QQARTQLSFA QERYDKDKEL MVQGAIPRRQ FLESETQLAA ARAALAKASS RLQVTEAAAQ LKRAQANVDV ARSRLALSGE TYQTRLRQLG TTPNADGTIT IKAPISGIVA DREATTGESG EDAGKKILTI VNSSKVQVSA NIYEKDLNQI QIGQPVRVKV NGLPDRSFAG RISVIGAVVE GQSRVVPVRA ELSNPDGVLK PGMFAELEIL TNRTPTTVLT IPKSALIETN DNKTIVFVQN GNAFQPVEVE LGKTSGDWVE IQNGLFEGDR VVTQRAMQLY AQSLRGKAET EVDHDTSIST APANQNRPLP WWMVIPVGGA MSAGTFWAGM YWANRRHRKR LIPLSEANGS GLHHHANGST AQPIVHPRAI EESPRPNQPE AEPQSPHPLP
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