| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_0972 |
|---|
| Symbol | |
|---|
| ID | 7286890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 784010 |
|---|
| End bp | 784972 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643583982 |
|---|
| Product | Polyprenyl synthetase |
|---|
| Protein accession | YP_002481719 |
|---|
| Protein GI | 220906408 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.23311 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.31243 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCGG CTGAGAACCC CCAATTAGAA ACTTTGCCAC AGCCATTGAC TCGTAGCGGC
AGCCCTACCC CATTCTCCGG TTTTGACCTG GTGTCCTACC TGAAGGAGCG GCAGCAATGG
GTGGATGCGG CCCTGGAACA ATCAATTTCA GTCACTTATC CTGAAAAAAT TTACCAGGCC
ATGCGCTATT CTCTCATGGC TGGCGGTAAG CGCTTACGGC CCATTCTCTG TCTGGCCACC
TGTGAGATGA CGGGCGGCAC GGTTGAAATG GCTATGCCCA CCGCCTGTGC CCTGGAAATG
ATCCACACCA TGTCTTTGAT CCATGACGAT CTGCCGGCTA TGGACAATGA CGATTACCGT
CGCGGTAAGC TGACCAATCA TAAAGTTTAC GGTGAGGATA TTGCCATTCT GGCGGGGGAT
GGGTTGTTGG CCTACGCCTT TGAATATGTA GCAGTGAAAA CCCAGGGGGT ACCGGCAGAG
TGGTTGCTCA AAGTTGTGGC CCGGCTCGGT CATGCTGTTG CGGCAACGGG GCTGGTGGGC
GGTCAAGTGG TTGACCTGGA ATGCGAAGGG GTTAAGGATG TGAGTGTGGA AACCCTGAAC
TTCATCCATG CTCATAAGAC CGGCGCTTTA CTGGAAGCCT CGGTGCTGTG TGGGGCGTAT
TTAACCGGAG CCAGTGATGA GGTTTTACAA AAGCTATCCC GCTATGCCCG TAATGTCGGT
CTGGCTTTTC AAATCATTGA TGATGTCCTG GATATTACCG CCACTCAGGA AGAGCTGGGT
AAAACGGCTG GTAAAGATTT ACGCGCTCAA AAAGTCACCT ATCCGAGTCT GTGGGGAATT
GAAGCCTCCC GTTGTCAGGC GAAACAATTA GTTGACGAAG CCAAGGCTGA ACTGGCAACC
TTTGGAGAAA GGGCAATTCC GCTGATGGCG ATCGCAGACT TTGTCACTGC TCGTACCCAT
TAG
|
|---|
| Protein sequence | MISAENPQLE TLPQPLTRSG SPTPFSGFDL VSYLKERQQW VDAALEQSIS VTYPEKIYQA
MRYSLMAGGK RLRPILCLAT CEMTGGTVEM AMPTACALEM IHTMSLIHDD LPAMDNDDYR
RGKLTNHKVY GEDIAILAGD GLLAYAFEYV AVKTQGVPAE WLLKVVARLG HAVAATGLVG
GQVVDLECEG VKDVSVETLN FIHAHKTGAL LEASVLCGAY LTGASDEVLQ KLSRYARNVG
LAFQIIDDVL DITATQEELG KTAGKDLRAQ KVTYPSLWGI EASRCQAKQL VDEAKAELAT
FGERAIPLMA IADFVTARTH
|
|---|
| |