Gene Cwoe_5806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_5806 
Symbol 
ID8736282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp6214417 
End bp6214938 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content74% 
IMG OID646506433 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003397582 
Protein GI284047242 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.805205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0101482 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CGCCGACGGC CGTGGATTCC AGCTGGGAGC GCTTCGAGGC GCTCTACCGC 
TCCAGCCGCG ACGACGTGTA CGCGTACGTC GCGACGCTGC TGCGCGACCG GGCCGCCGCG
GAGGACGTGG CGGCCCTCGC GTTCGAGCGC GCGTACCTCC GTCGGCGCTC GTTCGACCGC
CGCCGCGGCG ACGAGCGCGC CTGGCTGTTC GGGATCGCGC GCAACGCCGC GCTCGACGAG
CTGCGGCGGC GCAAGCGCCA CGCGCGGCTC GCCGCCGATC CCGCCGACCT CGACGCGACG
CCGGTCGAGG ACGGCGCCGA CGCCGCGCTC GCCCGCACGA CCGTCCGCGC CGCGCTCGAC
AGGCTCGACG CGCGCGAGCG CGAGCTGGTC GCGCTGAAGT TCCACGCCGG TCTCTCCAAC
GCCGAGATCG CGAAGGTGAT CGGCGTCAGC GAGTCGAACG CCGGAACGCT CCTGCACCGC
ACGATGACGA AGCTGAGGAA GGCCTGCCAT GCGCCGTCGT GA
 
Protein sequence
MTATPTAVDS SWERFEALYR SSRDDVYAYV ATLLRDRAAA EDVAALAFER AYLRRRSFDR 
RRGDERAWLF GIARNAALDE LRRRKRHARL AADPADLDAT PVEDGADAAL ARTTVRAALD
RLDARERELV ALKFHAGLSN AEIAKVIGVS ESNAGTLLHR TMTKLRKACH APS