Gene Cwoe_5243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_5243 
Symbol 
ID8735711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp5606263 
End bp5606919 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content70% 
IMG OID646505867 
Productribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 
Protein accessionYP_003397024 
Protein GI284046684 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1825] Ribosomal protein L25 (general stress protein Ctc) 
TIGRFAM ID[TIGR00731] ribosomal protein L25, Ctc-form 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCTG AAGAGACCAC ACTCACCGTC GCCCCCCGCG AGATCGAGGG CTCCCGCGCA 
ACCCGCCGCC TCCGTCGCAG CGGGCTCGTG CCGGGCATCG TCTACGGCGG GGACGCCGAC
CCGCTCCCGT TCCAGGTCGA CGCCCGCGAG CTGCGGAACG CGTTGGCCCA CGGCGGCGCC
GTCATCCAGC TCACGCTCGA TGGCGCACAG ACGCCGGTCG TCCTCAAGGA CCACCACCGG
CACCCGGTCA ACGGGAACAT GCTCCACGTC GACCTGCTGC GCGTCGACCT GACGCAGAGA
ATTCACGCGA CCGTCGTGGT CGAGGTGATC AACGCGGACG ACGCCCCCGG CATCAAGGGC
GGCGGCGTGC TCGAGCAGGT GACGCGCGAG ATCAACATAG AGGCGCTGCC GAACGAGATC
CCGGACACGA TCGAGCTCGA CGTGTCCAGC GTCGAGGTCG GCGACACCGT CTATCTCTCG
GCGCTCACGC CACCGTCCGG CGTCGCACTG CTGGACGACC TCGAGGAGAC CGTCCTCGTC
AGCGTCCTCG CGCCGAAGCT CTCGGTCGAG TCCGAGGACG AGATCGAGAC GGAGACCGCG
GTCGTCGGCG AGAAGGCCGA CGAGGCCGCT GCCTCCGAGG GCGACTCCGC CGAGTAG
 
Protein sequence
MAAEETTLTV APREIEGSRA TRRLRRSGLV PGIVYGGDAD PLPFQVDARE LRNALAHGGA 
VIQLTLDGAQ TPVVLKDHHR HPVNGNMLHV DLLRVDLTQR IHATVVVEVI NADDAPGIKG
GGVLEQVTRE INIEALPNEI PDTIELDVSS VEVGDTVYLS ALTPPSGVAL LDDLEETVLV
SVLAPKLSVE SEDEIETETA VVGEKADEAA ASEGDSAE