| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_5042 |
|---|
| Symbol | |
|---|
| ID | 8735508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 5375091 |
|---|
| End bp | 5375966 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 646505669 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003396828 |
|---|
| Protein GI | 284046488 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.634386 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCC CCGCGATCAC CGTCGAGACC GACACCGCGT CGCGCCGGCG CCGCGGCTCG
CGCTTCGGCA CGCTCGGCCC GCTCGGGTGG GCGGCGCTGG TCGTGGTCGT CGCGGCCGCG
CTGCTCGCGC TCTTCGGCCC GCTGCTGGCG CCGCACGACC CCAACCGCAT CGACCTCAAC
CTCGCGTACG TCGGCCCGTA CGCCGGCCAC CCGCTGGGGA TGGACGGCCA GGGCCGCGAC
CTGCTCTCGC GCCTGATGGT CGGCGCCCGC GCGAGCATGC TCGGGCCGCT GCTGGTGGTC
GCGATCTCGA CCGTCCTCGG CGGCGTGCTG GCGCTGCTGG CGGCCTGGCG CGGCGGCGTC
GTCGACCAGC TGATCGCGCG CCTGCTCGAC ACGCTGCTCG CCGTCCCCGG CCTGCTGCTC
GCGATCCTCG CGGTCGCCGT CTTCGGCCCC GGCCTGACGG CGCCGGTGAT CGCGCTCGGG
ATCTCCTACA CGCCGTTCTT CGCGCGCATC CTGCGCGGCT CGGCGCTGCG CGAGGTGCGC
CAGCAGTACG TCGAGGCGCT GCGCGTGCAG GGCTTCGGCG GGATCCCGAT CGTGCTCAAG
CACCTCGTGC CGAACCTGCT GCCGCTGCTG ACCGCGCAGG CGACGGTCAA CTTCGGCTAC
GCGCTGATCG ACCTCGCCGC GCTCTCCTAC CTCGGCCTCG GCGTGCAGCC GCCGACGGCG
GACTGGGGCG CGATGGTCTT CAGCGGCCAG GCCGGGATCG TGCAGGGCTA CTACATGGAG
TCGCTCGCGG CCGGCGCCTG CATCGTCGCC GTCGTGTGCG CGTTCAACGT GCTCGGCGAA
CGGCTCGCCG ACCGATGGGG AGCGGAGACG CGATGA
|
|---|
| Protein sequence | MSTPAITVET DTASRRRRGS RFGTLGPLGW AALVVVVAAA LLALFGPLLA PHDPNRIDLN
LAYVGPYAGH PLGMDGQGRD LLSRLMVGAR ASMLGPLLVV AISTVLGGVL ALLAAWRGGV
VDQLIARLLD TLLAVPGLLL AILAVAVFGP GLTAPVIALG ISYTPFFARI LRGSALREVR
QQYVEALRVQ GFGGIPIVLK HLVPNLLPLL TAQATVNFGY ALIDLAALSY LGLGVQPPTA
DWGAMVFSGQ AGIVQGYYME SLAAGACIVA VVCAFNVLGE RLADRWGAET R
|
|---|
| |