| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_4782 |
|---|
| Symbol | |
|---|
| ID | 8735248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 5104188 |
|---|
| End bp | 5104805 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646505411 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003396570 |
|---|
| Protein GI | 284046230 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.682663 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCAACCC CCCAGTCAGC ACCCGGCCCG CAGCCCGACG CGAAGCCGCT TCGCGCCGAT
GCGGCGCGCA ACCGGCTGAA GGTGCTCGAC GCCGCCCGCG CGGCGTTCTC CGAGCATGGG
CCGAACGCGC AGATGGACGA CATCGCCCGC CGCGCGGGGG TCGGCGTGGG GACCGTCTAC
CGCCACTTCC CGACCAAGCA GGCGCTCGCG CAGGCGATGA TGGAGCAGCG CGTCGAGCGG
ATCGTCACGT TCATCCAGAC CGAGATGCTG CCCGACCCCG ATCCCTGGCG CGCGCTCGCG
CGCTCGCTCG AGTTCTGCGG CACGATGCAG GAGCAGGACC GCGGCTACGC GGAGGCTGTC
GCCTCGGTCG CCGGCGGCAC CTCGGTCGGC GGCGGCATGA AGGAGGCCGG TCCCGCGCTG
ATCGAGCAGA TGTTCGCGCT GACGGCGGTC TTCATCGAGA GAGCCCACGC CAAGGGCGTC
GTGCGCGCCG ACCTGACCGC GGCCGACATG TCGCCGATCT ACGCCGGCCT CTCCGCCGTC
GTCCTCGCCG GCATCCCCGA CTGGCGGCGC TACGTCGAGA TACTGCTCGA CGGCCTGCGC
CCGCAGCCGG ACCGCTAG
|
|---|
| Protein sequence | MSTPQSAPGP QPDAKPLRAD AARNRLKVLD AARAAFSEHG PNAQMDDIAR RAGVGVGTVY
RHFPTKQALA QAMMEQRVER IVTFIQTEML PDPDPWRALA RSLEFCGTMQ EQDRGYAEAV
ASVAGGTSVG GGMKEAGPAL IEQMFALTAV FIERAHAKGV VRADLTAADM SPIYAGLSAV
VLAGIPDWRR YVEILLDGLR PQPDR
|
|---|
| |