| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_3823 |
|---|
| Symbol | |
|---|
| ID | 8734278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 4059820 |
|---|
| End bp | 4060713 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 646504445 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003395615 |
|---|
| Protein GI | 284045275 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.445189 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGATC ACGAGTGGAT CGCAGAGCAG TTCGAGGGGC AGCGGCGCCA CCTGAACGCC
GTCGCTTACC GGATGCTCGG CTCGCGCAGC GAGGCCGACG ACGCCGTCCA GGAGGCGTGG
CTGCGAGCCA GCCGCGCCGG CGCCGACGAG GTCGAGAACC TCGGCGGCTG GCTGACGACG
ATCGTCGCGC GCGTCTGCCT GAACATGCTG CGGTCCCGCC GGACGCGGCA CGAGGTGCCG
CTGGAGGAGC CCGAGCACGT GCGTGTGCCG GACCCGCTCG TCAGCCGCGC CGAGGGCCAC
GATCCCGAGC AGGCGGCGCT GCTCGCCGAC TCGGTCGGGC TCGCGCTGCT CGTCGTGCTC
GAGACGCTCG GGCCCGCCGA ACGGCTCGCG TTCGTGCTGC ACGACCTGTT CGGCATGCCG
TTCGACGAGA TCGCCCCGAT CGTCGACCGC TCCCCGGCCG CGACGCGCCA GCTCGCCAGC
CGCGCCCGCC GCCGCGTCCG CGGCGCCGCC CCGGCGCCCG ATCCCGACCT CGCACGTCAG
CGCGTCGCCG TCGACGCCTT CTTCGCCGCC GCCCGCGACG GCGACTTCGA CGCGCTCGTC
GCCGTGCTCG ACCCCGACGT CGTCCTGCGC ACCGACGGCG GCCTCACCCG CGGCGCCTCG
GTCGTGGTCC GCGGCGCCGA GGCGGTCGCC GGCCGCGCAC GCGCGTATGC GCGGATTTCC
GCGTCCGTGC ACCCAGCGCT CGTCAACGGC GCCGCGGGCG TCGTCGTCGT CGCCTCCGGC
CGCCCGTTCT CGATCATGGG CTTCACCGTC GCCGACGACA GGATCGTCGC GATCGACGCG
CTCTCAGACC CCGCCCGCCT CGCCCAGCTC GACCTGACGG CGTTCGGGGT GTAG
|
|---|
| Protein sequence | MDDHEWIAEQ FEGQRRHLNA VAYRMLGSRS EADDAVQEAW LRASRAGADE VENLGGWLTT
IVARVCLNML RSRRTRHEVP LEEPEHVRVP DPLVSRAEGH DPEQAALLAD SVGLALLVVL
ETLGPAERLA FVLHDLFGMP FDEIAPIVDR SPAATRQLAS RARRRVRGAA PAPDPDLARQ
RVAVDAFFAA ARDGDFDALV AVLDPDVVLR TDGGLTRGAS VVVRGAEAVA GRARAYARIS
ASVHPALVNG AAGVVVVASG RPFSIMGFTV ADDRIVAIDA LSDPARLAQL DLTAFGV
|
|---|
| |