Gene Cwoe_3780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_3780 
Symbol 
ID8734235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp4016853 
End bp4017680 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content79% 
IMG OID646504402 
ProductType II secretion system F domain protein 
Protein accessionYP_003395572 
Protein GI284045232 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4965] Flp pilus assembly protein TadB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGGCG CGGCGGCGGT CGCCGGGTTG GCGGGAGCGG TCGCCGCGGT CGCGCTGGTC 
GAGCTGGCCG CGCTCACGGC TGGCCGGCGG CGGCGCTCGT CGCGCGCGGT CGCAGTCGGG
CTGCTCGCAC GGCTCGGTCG CCGCGTCGGC GCGCCCGCCG CGCCGCGTGA CCTCGCCGCG
CGCCTCGCCG CTGCGGGGCG GCCGCTCGGG TTGCGGGTCG GCGACGTGAT GGCGATCAAG
GGCGGGGCGG CCGTGCTCGG CCTCGCGCTC ACGCTGCCGC TCGGTGCCCT GCTGCCGGGC
CGGCTGCCGC TGGTCGTTCC GTTCGTGCTC CCGCTCGGCG GCTTCGTCGC ACCGGACCTG
TGGCTGCGTC GGCGCGCTCG CGCGCGCGGG CGCGAGATGG AGGCCGAGCT GCCCGACCTG
CTCGACCTCC TGCGGGTCGC ACTCGGCGCC GGCCTGCCGC TGGAGCGCGC GGTCGGCGAC
GTCGCCGACC GCGCGACCGG ACTGCTCGCC CGCGAGTGGC GGACGGTCGC CGTCGAGATC
GGCCTCGGGA TGCCGCGCGA GAGGGCGCTC GTGGCGCTCG CCGAGCGCTG CCCGACACCG
GGCGTCGGCG TCCTGGTGCG GACGCTCGAA CGTGCCGCTC GCCACGGCGC GCCGCTCGGC
GAGGCGCTCG CGGCGCAGGC GCGCGAGGCC CGCTCGACCC GCGCACGCCG TCTCGACGAG
CAGGCCGCAC GCGCGGCGCC GAAGATCCAG CTCGTCGTCG CGCTGCTGCT CGTGCAGTCG
GTCCTCCTGC TCGTCGGCGC GGCCCTGCTC GCCTCGTTCG CCGGATGA
 
Protein sequence
MSGAAAVAGL AGAVAAVALV ELAALTAGRR RRSSRAVAVG LLARLGRRVG APAAPRDLAA 
RLAAAGRPLG LRVGDVMAIK GGAAVLGLAL TLPLGALLPG RLPLVVPFVL PLGGFVAPDL
WLRRRARARG REMEAELPDL LDLLRVALGA GLPLERAVGD VADRATGLLA REWRTVAVEI
GLGMPRERAL VALAERCPTP GVGVLVRTLE RAARHGAPLG EALAAQAREA RSTRARRLDE
QAARAAPKIQ LVVALLLVQS VLLLVGAALL ASFAG