Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cwoe_3780 |
Symbol | |
ID | 8734235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Conexibacter woesei DSM 14684 |
Kingdom | Bacteria |
Replicon accession | NC_013739 |
Strand | - |
Start bp | 4016853 |
End bp | 4017680 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 646504402 |
Product | Type II secretion system F domain protein |
Protein accession | YP_003395572 |
Protein GI | 284045232 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4965] Flp pilus assembly protein TadB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGGCG CGGCGGCGGT CGCCGGGTTG GCGGGAGCGG TCGCCGCGGT CGCGCTGGTC GAGCTGGCCG CGCTCACGGC TGGCCGGCGG CGGCGCTCGT CGCGCGCGGT CGCAGTCGGG CTGCTCGCAC GGCTCGGTCG CCGCGTCGGC GCGCCCGCCG CGCCGCGTGA CCTCGCCGCG CGCCTCGCCG CTGCGGGGCG GCCGCTCGGG TTGCGGGTCG GCGACGTGAT GGCGATCAAG GGCGGGGCGG CCGTGCTCGG CCTCGCGCTC ACGCTGCCGC TCGGTGCCCT GCTGCCGGGC CGGCTGCCGC TGGTCGTTCC GTTCGTGCTC CCGCTCGGCG GCTTCGTCGC ACCGGACCTG TGGCTGCGTC GGCGCGCTCG CGCGCGCGGG CGCGAGATGG AGGCCGAGCT GCCCGACCTG CTCGACCTCC TGCGGGTCGC ACTCGGCGCC GGCCTGCCGC TGGAGCGCGC GGTCGGCGAC GTCGCCGACC GCGCGACCGG ACTGCTCGCC CGCGAGTGGC GGACGGTCGC CGTCGAGATC GGCCTCGGGA TGCCGCGCGA GAGGGCGCTC GTGGCGCTCG CCGAGCGCTG CCCGACACCG GGCGTCGGCG TCCTGGTGCG GACGCTCGAA CGTGCCGCTC GCCACGGCGC GCCGCTCGGC GAGGCGCTCG CGGCGCAGGC GCGCGAGGCC CGCTCGACCC GCGCACGCCG TCTCGACGAG CAGGCCGCAC GCGCGGCGCC GAAGATCCAG CTCGTCGTCG CGCTGCTGCT CGTGCAGTCG GTCCTCCTGC TCGTCGGCGC GGCCCTGCTC GCCTCGTTCG CCGGATGA
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Protein sequence | MSGAAAVAGL AGAVAAVALV ELAALTAGRR RRSSRAVAVG LLARLGRRVG APAAPRDLAA RLAAAGRPLG LRVGDVMAIK GGAAVLGLAL TLPLGALLPG RLPLVVPFVL PLGGFVAPDL WLRRRARARG REMEAELPDL LDLLRVALGA GLPLERAVGD VADRATGLLA REWRTVAVEI GLGMPRERAL VALAERCPTP GVGVLVRTLE RAARHGAPLG EALAAQAREA RSTRARRLDE QAARAAPKIQ LVVALLLVQS VLLLVGAALL ASFAG
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