Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cwoe_3642 |
Symbol | |
ID | 8734097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Conexibacter woesei DSM 14684 |
Kingdom | Bacteria |
Replicon accession | NC_013739 |
Strand | - |
Start bp | 3878201 |
End bp | 3879754 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 646504264 |
Product | histidine ammonia-lyase |
Protein accession | YP_003395434 |
Protein GI | 284045094 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.556064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGCGC CCGTCACGCC CGTCACGCTC GACGGTGCGC TGTCGGCGGA GGCGGTCGCG GCGATCGCGG CCGGCGCGTC CGTCGCGCTC GACCCGGACG CGCTCGCGCG GGTCGAGCGC AACCGCGCGG CGCTCGAGGA GCTCATCGGC GCCGGCACGC CGATATACGG GATCACGACC GGCTTCGGCG CGTTGCTCGA CAGCGCCGTC GCGCCGGCCT CGCGCCACCA GCTGCAGGTC AACCTGCTGC GTTCGCACGC CGCCGGCAGC GGCGAGGAGC TGCCGCCCGA GGTCGTCCGC GCCGCCCTCG CGATCCGCCT CAACAGCCTT CTGCTCGCCC ACTCCGGCGT CCGTCGCGAG ACGCTGGAGC GGATCGCCGA GCTGCTCAAC GCCGGCTTCG CGCCGTGCGT CCCGCAGACC GGCTCGCTGG GCGCCAGCGG CGACCTCGCG CCCTCCGCGC ACGCGTTCCT GCCGCTGATC GGGGAGGGGG AGGTGCGCGA CCGCGACGGC CGCCTGCTGC CCGGGGCCGA GGCGCTCGCG GCGCTCGGGC GCGCGCCGCT CGCGCTCGAC ACGAAGGAAG GGCTCGCGCT CGTCAACGGC ACCCACTTCA TGGCGGCGAT CGGCACGCTG CTGACCGCCC GCGTCGGCAT GCTGCTCGAC ACCGCAGACG TCGCGGCCGC GCTCAGCGTC GACGCGCTCA GCGGCGCGAC CCCGGCGTTC GACGCGCGCG TCCACGCGCT GCGCCCGCTG CCCGGCCAGG TCACCTCCGC CGCCAACGTG CGCGCGCTCC TGCGCGGATC GCGGCGGGCC CGCGCCGCCG GCGACGGCGG GTCGTTGCAG GATGCCTACT CGCTGCGCTG CGCGGCGCAG GTCCACGGCG CCGCGCGCGA GGGCTTCGGC TTCTTCGCGC GGCTCGTCGC CGTCGACCGC TCCGCCGTCA CCGACAACCC GCTCGTCTTC GACGGCCCCG ACGCGGCCGT CATCTCCGCC GGCAACTTCC ACGGCCAGAG CCTCGCGCTC GCGTTCGACA CGCTCAAGCT CGCGCTCGCC GACCTCGGCT CGATCAGCGA GCGGCGCACG TTCCGGCTCG TCTCGCCGTC GCTCAACGGC ACGCTGCCCG GCTTCCTCAC GCCCGACCCG GGCCTGTCGA GCGGCTACAT GATCGTCCAG TACACGACCG CCGCGGTCGT CGCGGAGCTG CGGGCGCTCG CGCACCCGGT CAGCGTCGAC ACGGTGCCGA CGTCCGACAA CCAGGAGGAC CACGTCAGCA TGGGGATGAC CGCCGCGCTG ATGGCGCTGG AGGCGGCCGA GCGGCTGGAG CGGGTGCTCG CCGCGGAGCT GCTGTGCGGC TGCCAGGCGC TCGACTGCGA GCCGGCGGTC GCGGCGTCGC CCGCGAGCCG GCGCGCGCAT GCGCTCGTGC GCGAGCGCAT CGAGCCGCTG ACGGCCGACC GGCCGCCCGC GCCGGACCTC GCCGCGATCG CCGCGCTCGT CCGTAGCGGC GCGTTCGCCG CCGTCCTCGC GGCGGCGCAT GACGGCACGG GCGTGCCGGC ATGA
|
Protein sequence | MSAPVTPVTL DGALSAEAVA AIAAGASVAL DPDALARVER NRAALEELIG AGTPIYGITT GFGALLDSAV APASRHQLQV NLLRSHAAGS GEELPPEVVR AALAIRLNSL LLAHSGVRRE TLERIAELLN AGFAPCVPQT GSLGASGDLA PSAHAFLPLI GEGEVRDRDG RLLPGAEALA ALGRAPLALD TKEGLALVNG THFMAAIGTL LTARVGMLLD TADVAAALSV DALSGATPAF DARVHALRPL PGQVTSAANV RALLRGSRRA RAAGDGGSLQ DAYSLRCAAQ VHGAAREGFG FFARLVAVDR SAVTDNPLVF DGPDAAVISA GNFHGQSLAL AFDTLKLALA DLGSISERRT FRLVSPSLNG TLPGFLTPDP GLSSGYMIVQ YTTAAVVAEL RALAHPVSVD TVPTSDNQED HVSMGMTAAL MALEAAERLE RVLAAELLCG CQALDCEPAV AASPASRRAH ALVRERIEPL TADRPPAPDL AAIAALVRSG AFAAVLAAAH DGTGVPA
|
| |