Gene Cwoe_3500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_3500 
Symbol 
ID8733949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp3723398 
End bp3724519 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content72% 
IMG OID646504117 
Producturea ABC transporter, permease protein UrtC 
Protein accessionYP_003395293 
Protein GI284044953 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID[TIGR03408] urea ABC transporter, permease protein UrtC 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.975669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.196698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCT GGGCTGCGCG GATCTTCCCG CCCGGCACGC AGCGCGCCGG CTTCCTGATC 
CGCTTCACGC TCGCGGCCGC GGCGCTGCTG CTGGTCGCGC CCGCGCTGCT GTCGGACTTC
CGCCTGTCGC TGCTGGCGAA GTACCTCTGC TTCGCGATCA TCGCCGTCGG GATCGGGCTC
GCCTGGGGCC AGGGCGGGAT GCTCGTGCTC GGCCAGGGGC TGTTCTTCGG CCTCGGCGGC
TACGCGATGG GGATGCACAT GAAGCTCGCG GAGGCCGGCC CCGGTCAGCT GCCGGACTTC
ATGACCTGGA GCGGCGTGAC GGAGCTGCCG TGGCTGTGGG AGCCGTTCCG CAGCTCGTGG
GTCGCGATCG CGGCCTGCGT GCTGGTGCCG ATGGCGGTCG CGGCGCTGCT CGGCACGCTG
ATCTTCCGCC AGCGGGTCCG CGGCGCCTAC TTCGCGATCC TCTCGCAGGC GATGGCGGCC
GCGTTCGTGA TCGTGCTCGT CGGCCAGCAG GGCACGACCG GCGGCACCAA CGGCCTGACG
AACTTCACGA GATTCTTCGG CCTCGACCTG ACGAACCCGG CCGACAAGCG GACGCTCTAC
CTGCTCGTGG CCGTCGTCTT CCTCGTCGTC TTCGTGCTCG CGCGCCAGGT CTCGCGCAGC
CGCTACGGCA AGGTGCTGGT GGCGGTGCGC GACGCGGAGG ACCGCGTCCG CTTCCTCGGC
TACGACCCCA CGCGCGTGAA GGTGATCGCC TACGTCGCGG CGGCCGGCAT GGCCGGACTC
GCGGGCGCGC TGTTCGTGCC GGTCGTCGGG ATCATGTCCC CCGCCCTGCT CGGGATCGTC
CCGTCGATCG AGATGGTGAT CTGGGTCGCG CTCGGCGGGC GCACGGTGCT CGCGTGGGCC
GCGGCTGGCG CGATCCTCGT CAGCTGGGCG AGAACGGACC TGTCGGAGCG CTTTCCGTCC
GGCTGGCTCT ACCTCCAGGG CGCGCTCTTC ATCGTCGTGA TCGCGTTCGC CCCGAAGGGC
CTGGCAGGCG TCTCGGAGGC GCTGCAGGAG CGGGCGCGAA GACTGCGGTC GCGACGGGCG
CCGCAGCCCG TCGCCGAGAG AGAGCTGGAG GTCGTGCGAT GA
 
Protein sequence
MSAWAARIFP PGTQRAGFLI RFTLAAAALL LVAPALLSDF RLSLLAKYLC FAIIAVGIGL 
AWGQGGMLVL GQGLFFGLGG YAMGMHMKLA EAGPGQLPDF MTWSGVTELP WLWEPFRSSW
VAIAACVLVP MAVAALLGTL IFRQRVRGAY FAILSQAMAA AFVIVLVGQQ GTTGGTNGLT
NFTRFFGLDL TNPADKRTLY LLVAVVFLVV FVLARQVSRS RYGKVLVAVR DAEDRVRFLG
YDPTRVKVIA YVAAAGMAGL AGALFVPVVG IMSPALLGIV PSIEMVIWVA LGGRTVLAWA
AAGAILVSWA RTDLSERFPS GWLYLQGALF IVVIAFAPKG LAGVSEALQE RARRLRSRRA
PQPVAERELE VVR