| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_3374 |
|---|
| Symbol | |
|---|
| ID | 8733823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 3596418 |
|---|
| End bp | 3598268 |
|---|
| Gene Length | 1851 bp |
|---|
| Protein Length | 616 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 646503991 |
|---|
| Product | exodeoxyribonuclease V, alpha subunit |
|---|
| Protein accession | YP_003395167 |
|---|
| Protein GI | 284044827 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
|---|
| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit
[TIGR01448] helicase, putative, RecD/TraA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.860557 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCGC TGCGCGAGCG AGACCCCTTC GACGTCCGCC TCGCGCGCGG GGCGCCAGCG
CTGCTGCGAG CGTTCAACGA CGCTGGCGTG CTCTCGATCG CCGACGTCCA GGTCGCGCGG
CGCCTGGCCG CGCTGGGAGA CGTCGCCGAC GCTGAGCTGC TGCTCGCCTT CGCGCTGGCG
GCGCGTGCGC CGCGACTCGG TCACGTGCTC GTCGACCTCG CGACGATCCG CGCGACGGTC
GCCGTCGACA CGGAGGAACG GATCGACCTC GACGCCCTCC CCTGGCCTGA GACCGGCGCC
TGGGTCGCGG CGTTGGCCGG CTGCGCGCTC GTCGGCGTCG GCGACGAGGA CGGCGCCGAC
ACGACGCCGC TGCGGCTCGT CGGCACCGCG CTCTACCTCG ACCGCTACTG GCGCGAGGAG
CGCCAGGTCG CAGCCGACCT CCGCGGCCGT CTCGAGGCGC TGCCGGCGGG TGTCGACGAG
GCGGCGCTGA CCGCTCGGCT GAAGCGCCTC GCGCCCGACG ACGCGCGGCA GCGCAATGCG
ATCGCGGCTG CCGCCGTGCG CCGATTCGCG ACGGTGGCCG GCGGCCCCGG GACCGGCAAG
ACGACGACGG TTGCACAGAT CGCCGCGCTC GTCGTCGAAC AGGCGCGAGC GGAGGGCCGG
CCGGTCCCGT TGATCGCGCT CGCCGCGCCG ACCGGAAAGG CGGCGGCGCG TCTGGAGGAG
CAGGTCCACC ACCGCGCCGC CCAGCTCGAC ACCACGCCCG ACGTGCGCGA GCAGCTCGCC
GGGCTGCGCG CGTCGACGTT GCACCGACTG CTCGGATGGC GCCCGGGAAG TCACAGCCGC
TTCCGTCACG ACCGCCACGC GCGGCTGCCG CACGACATGG TGATCGTCGA CGAGGCGTCG
ATGGTCTCGC TCACGCTCAT GGCGCGTCTG CTCGAGGCCG TGCGGCCCGA TGCGCGCCTC
GTGCTCGTCG GCGACCCCGA CCAGCTCGCC TCGATCGAGG CCGGTGCGGT GCTCGGCGAC
ATCGTCCGCG CAGCGCGGCC GGGCGCCGGC ATCGTGCAGC TCGAGCGCGT CTACCGCTTC
GGTGCGGGCA TCGGAGCGGT CAGCGCCGCC GTTCGCGCCG GCGATGCGGA TGCGCTCGTC
GCGGCGCTCG TGAGCGCTCC TGCCGAGGTC ACGTGGATCC CGATCGACGC GGGCGACCCC
GCGACCGCGA CAGCGGCCGT CCTGGCGCCC GTGCGCGACG CGGCCACACG AGCCGGCCGG
GAGGTCATCG CCGCCGCGCT CGGCGGCGAC GGACGCGCGG CGCTCGACGC GCTCGGCGCC
TTCCGGCTGC TCTGCGCGCA CCGCCGCGGC CCCCACGGCG TCACGACGTG GATGCCGCTG
GTCGAGGGCT GGCTCGCGGG CGACATCGCC GCCACCGGCA CCTGGGCCCG CGACTATCCT
GGTCGCCCGC TGCTGATCAC CGCCAACGAC TACGACCTCG ACCTCTTCAA CGGCGACACC
GGCGTCGTCG TCGCCAGCCC CTCCGGCGGC CTCACCGCCG CATTCGAGCG ACGCGGCGAG
ATCGTCGCCG TCCGCCCCGC CCGCCTGCGC GCCGTCGACA CGGTCCACGC GATGACGATC
CACAAGAGCC AGGGATCGCA GTTCGGCACC GCCGCCGTCG TGGTCCCGGC CGCCGACTCC
CGCATCCTCA CCCGCGAGCT GCTCTACACC GCCGTCACCC GCGCCCGCCG CCACCTCATC
GTGATCGGCA CCGAGGACGC GCTCCGCGCC GCCGTCCACC GCCCCGCAGC CCGCGCCTCC
GGCCTCAGCG GTCGTCTGGG CGCCTCCGTC GTGTCGCAAC CCTTCGGATG A
|
|---|
| Protein sequence | MTSLRERDPF DVRLARGAPA LLRAFNDAGV LSIADVQVAR RLAALGDVAD AELLLAFALA
ARAPRLGHVL VDLATIRATV AVDTEERIDL DALPWPETGA WVAALAGCAL VGVGDEDGAD
TTPLRLVGTA LYLDRYWREE RQVAADLRGR LEALPAGVDE AALTARLKRL APDDARQRNA
IAAAAVRRFA TVAGGPGTGK TTTVAQIAAL VVEQARAEGR PVPLIALAAP TGKAAARLEE
QVHHRAAQLD TTPDVREQLA GLRASTLHRL LGWRPGSHSR FRHDRHARLP HDMVIVDEAS
MVSLTLMARL LEAVRPDARL VLVGDPDQLA SIEAGAVLGD IVRAARPGAG IVQLERVYRF
GAGIGAVSAA VRAGDADALV AALVSAPAEV TWIPIDAGDP ATATAAVLAP VRDAATRAGR
EVIAAALGGD GRAALDALGA FRLLCAHRRG PHGVTTWMPL VEGWLAGDIA ATGTWARDYP
GRPLLITAND YDLDLFNGDT GVVVASPSGG LTAAFERRGE IVAVRPARLR AVDTVHAMTI
HKSQGSQFGT AAVVVPAADS RILTRELLYT AVTRARRHLI VIGTEDALRA AVHRPAARAS
GLSGRLGASV VSQPFG
|
|---|
| |