| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_3109 |
|---|
| Symbol | |
|---|
| ID | 8733556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 3316381 |
|---|
| End bp | 3318153 |
|---|
| Gene Length | 1773 bp |
|---|
| Protein Length | 590 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 646503725 |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003394903 |
|---|
| Protein GI | 284044563 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.516778 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCAA CCGCCTCCGC CGTCTCCTGG CGCGCGCTCG GGCCGCACGT ACGACCGCAC
CGCCGCGTGC TCGCAGCGGG CGCGCTGCTC GGACTGCTCG GCAGCGGCGC GGCGCTCGCG
CAGCCGCTCG CGGCGCAGAG CGTGATCGAG GCGCTGCAGG AGCGCGAGTC GGTGCTGACG
CCGATCGTCG TGCTGAGCGC GCTGGTCGTC GTCGGCGCGC TGCTGACCGG CACCTACCTG
CTGCTGCTCG AACGGACCGC GGAGCGGATC GTGCTGCGCG CGCGGCTCGG GCTCGCGGCG
CGGATGCTGC GGCTGCGCGT GCCGGCGATC GACCGCCAGT CGCCCGGCGA CCTGATAACG
CGGATGACGT CGGACACGAC GCTGCTGCGC GCGGCCGCCT CCAACGGCGT CGTGCAGCTC
GTCAACGGCG CGGTCGGCCT GCTCGGCGCG ATCGTGCTGA TGGCCGTCGT CGACTGGGTC
CTGCTGCTCG TCACGCTCGG CGTGCTGGGG ACGATCGCGT TCGGCGTGCT CGTGCTGCTC
CCCCGCATCA GCCGTGCGAC CGAACGCGGC CAGGCCGCCG TCGGCGAGAT CGGCTCGGTG
CTCGAACGCT CGCTCGCGGC TGTGCGGACG GTGAAGGCGA GCGGCGCCGA GGCGCGCGAG
ACGGCCGCGA TCGAGGACGC CGCGAGGCGC TCCTACGGCG CCGGACTGGA GCTGGCGCGC
CACCAGGCGG TGCTGGGGGT CGCGACCGGG CTGGCGATCC AGGTCTCGTT CCTCGCCGTG
CTCGGCGTCG GCGGCGCGCG CGTCGCCGAC GGCGCGATGG ACGTCGCGGC GCTGGTCGCG
TTCCTGCTCT ACCTCTTCTA CCTCGCCGAG CCGGTCTCGG GCCTGGTGCA GGCGGGGATC
GAGCTGCAGG CCGGGCTCGG CGCGCTCGCG CGGCTCGACG CGACCGAGGA GCTGCCCGTC
GAGGACGACG TCGAGACGCC GGCCGACAGC GTGCTGGAGT CGGCGATCGC GGCAGGCCCG
GCGCCCGGCG TCCCGCTGAT CTCGTTTGCG CGTGTCGCGT TCGCCTACGG GGACGAGCGC
GCGCCGGTGC TGCACGACGT CTCGTTCAGC GTCCCGGAGG GCGGGCAGAC GGCGCTCGTC
GGGCCGTCCG GCGCGGGCAA GACGACCCTG TTCGCGCTGC TGCAGCGCTT CTACGAGCCG
ACCGGCGGCG CGGTCCTGCT CGGCGGGCGC GACATCTCGA CGATCCCGCG TGGAACGCTG
CGGCGCAGCA TCGGGTCGGT CGAGCAGGAC GCGCCCGTGC TCGCCGGGAC GCTGCGCGAC
AACCTGCTCT ACGGCGCGCC CGGCGCGAGC GGCGCCGAGC TGGCCGAGGT CGTCGCCGAG
ACGCGGCTGG AGGAGCTGGT CGCGCAGCTG CCGGAAGGGC TCGACAGCGA GATCGCCAGC
CGCGGCACGA GCCTGTCGGG CGGCGAGCGC CAGCGGATCG CGATCGCCCG CGCGCTCCTG
CGCCGGCCGC GGATCCTGCT GCTCGACGAG GCGACCTCCC AGCTCGACGC GCGCAACGAG
ATGGCGCTGC GTGACACGAT CGCGCGCGCC GCCCGGCGCT GCACGGTGCT CGTGATCGCC
CACCGCCTCT CGACGGTCGT CGCGGCCGAC CAGATCGTCG TGCTCGACGC CGGCCGCGTC
CGCGCCGCCG GTACGCACGC CGAGCTGGTC GAGCACGACG CGCTCTATCG CGAGCTGGCG
ATGACGCAGC TGCTGGCCGG CCCGGCCGGC TGA
|
|---|
| Protein sequence | MSATASAVSW RALGPHVRPH RRVLAAGALL GLLGSGAALA QPLAAQSVIE ALQERESVLT
PIVVLSALVV VGALLTGTYL LLLERTAERI VLRARLGLAA RMLRLRVPAI DRQSPGDLIT
RMTSDTTLLR AAASNGVVQL VNGAVGLLGA IVLMAVVDWV LLLVTLGVLG TIAFGVLVLL
PRISRATERG QAAVGEIGSV LERSLAAVRT VKASGAEARE TAAIEDAARR SYGAGLELAR
HQAVLGVATG LAIQVSFLAV LGVGGARVAD GAMDVAALVA FLLYLFYLAE PVSGLVQAGI
ELQAGLGALA RLDATEELPV EDDVETPADS VLESAIAAGP APGVPLISFA RVAFAYGDER
APVLHDVSFS VPEGGQTALV GPSGAGKTTL FALLQRFYEP TGGAVLLGGR DISTIPRGTL
RRSIGSVEQD APVLAGTLRD NLLYGAPGAS GAELAEVVAE TRLEELVAQL PEGLDSEIAS
RGTSLSGGER QRIAIARALL RRPRILLLDE ATSQLDARNE MALRDTIARA ARRCTVLVIA
HRLSTVVAAD QIVVLDAGRV RAAGTHAELV EHDALYRELA MTQLLAGPAG
|
|---|
| |