Gene Cwoe_2421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_2421 
Symbol 
ID8732864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp2568163 
End bp2569035 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content69% 
IMG OID646503037 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003394219 
Protein GI284043879 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00509321 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCTAGAC GCTGGTGGAT CCCCCTGCTG CCGGGCAGCG CCTGGCTGGT CGCGCTGTAC 
CTCGTGCCGC TCGCGCTCGT CGCCGCCGCC TCGGTCGCGA CGCCCGACGT GATCGGGCGC
CCGGTCTACG GCTGGAACCT GGAGAGCTTC GACCAGGTCT TCCAGCCGAT GTTCCTGCCG
ATCGTCCTCA AGACGTTCGC CTTCGCGGCC GGCGCGACCG TGCTGTGCCT GCTGATCGGC
TACCCGACGG CGTACACGAT CGCCCGCTTC GGCGGCCGCT TCAGAACGTT CCTCGTGCTG
CTCGTGCTGG TGCCGTGGTT CACCGACTAC CTCGTGCGGA TCTACGCGTG GGTCCAGATC
CTCGGCAACG AGGGCCTGCT GAACGCGCTG CTGAAGAACC TCGGGCTCGT CGACGAGCGC
GGCGCGTCGC TGATCGGCAA CTCCTACGCC CTCTTGGTGG GGCTCACCTA CAACTTCCTC
CCGTTCATGA TCATCTCGGT CTACGTCGCG GTCGACCGCC TCGACGGTCG CCTGATCGAG
GCCGCCCGCG ACCTTCACGC CGGCCGCTTC GCGACGTTCC GCCACGTCAC GCTGCCGAAC
ACCGTCCAGG GCGTGGCAGC GGGCTGCCAG CTCGTCTTCC TGCTCGCGCT CGGAGACTTC
GCCACCGCGC AGTTCCTCGG CGGCTCGCAG TACATGCTCG GCAACCTGAT CCGCGACCAG
TTCTCGACCG CCGGCTCGCT GCCGTTCGGC GCCGCGCTGA CGGTGACGCT GCTCACGGGC
CTGCTGATCG TCGCGTTCGC CGGCCGCCTG CTGCTGCGGA CCGGCAAGGG CAAGAGCAAG
GGCGGCAGCG CCGCCGAGGC GGTCGTCGCA TGA
 
Protein sequence
MARRWWIPLL PGSAWLVALY LVPLALVAAA SVATPDVIGR PVYGWNLESF DQVFQPMFLP 
IVLKTFAFAA GATVLCLLIG YPTAYTIARF GGRFRTFLVL LVLVPWFTDY LVRIYAWVQI
LGNEGLLNAL LKNLGLVDER GASLIGNSYA LLVGLTYNFL PFMIISVYVA VDRLDGRLIE
AARDLHAGRF ATFRHVTLPN TVQGVAAGCQ LVFLLALGDF ATAQFLGGSQ YMLGNLIRDQ
FSTAGSLPFG AALTVTLLTG LLIVAFAGRL LLRTGKGKSK GGSAAEAVVA