| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_2236 |
|---|
| Symbol | |
|---|
| ID | 8732679 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 2352865 |
|---|
| End bp | 2354508 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646502854 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_003394036 |
|---|
| Protein GI | 284043696 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0669965 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.364829 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGCAC ACTCGTTCCG GGCCGTCGCG GGCGCCGTCG CAGTCGGCGT CGCGCTGCTT
GGCGCCGGCT GCGGCCGATC CAGCGAGGAC GCCGGCGGCA CGACGGCCGG CGTGAGCAGA
TCGGCTCCGC TCTCGGCCAC GACGCCCGCC GGGTCCGCCG AGGTCGACAG CGCGACGTGG
GCGATGTACC GCGACACGAT CACGGTCGAC CCGATCTTCG CCGGTGACTA TCCCGAGCGT
CAGGTCGTCG CGCTGATGTG CGAGTCGCTG CTGCGCCAGC AGCCGGACGG CACGACGGCG
CCGGGCCTGG CGAGACTCTC CTACCGCGAC CCGAGAACGG TCGTGCTCAC GCTCGCCGAC
GGCGTCAGAT TCTGGGACGG CAGCCCGCTG ACCCCGGCTG ACGTCGTCTA CAGCATCGAC
CGCAACCGCG ACCCGAGAGT CGGCGGGTAC TGGGCGAGCA ACTTCGGTAG CGTCGACACT
GTCACCGTGA CTGGCGAGCA TGAGGTGACA CTCAAGCTCA GACGGCCGGA CTACTGGCTC
GAGGGCGTGC TCTCGTTCAT GGCGGGAGTG GTGGTGAAGA AGTCGTACGC GCAGGAGAGA
GGCAAGGACT ACGGCACGCC GAGCGGCGGC GCGATGTGCA CCGGCTCCTA CAGACTCGGC
GCCTGGAGAA CCGGCGGCGC GGTCCAGCTC GTGCGCAACG ACGACTACTG GAACTCCGGC
GTGAGACCGC ACGTGCGAGA GCTCAGCTTC AAGGGAGTGC CCGACCACTC CGCCCTCACC
GCCGGCCTGC TGACCGGCGA GATCGACGGC ACCTACCCGC TCGGGCTCTC GACGCTCGAC
CAGCTGCGCC AGAGCGACGC GGTCGAGGTC TACGAGGGGC CGTCGTACAT GGTCGGCGCG
ATGATCCTCA ACCTCGACGG CCCGCTCGGC GACGTGCGCG TGCGCCAGGC GCTGTCGTTG
GCGCTCGACC GCCAGGGCAT CGTCGCGACG ACCTTCAAGG GCACCGCCGA GCCCTCGCGT
GCGCTCGCCA GCCCCGGCAC CTGGGGCTAC GCGAAGGACG TCTTCAGCGC CGCGTGGGAC
GCGCTCCCCG CGCCTGAGCC CGACCTCGAC GCGGCCAGAA GACTGGTCGA GGAGGCCGGC
GCGAGCGGCA GAGAGATCAC GATCGCGACG TCGAGCGAGC TGCAGAACAT CGACACCGAC
GCGAACGCCT ACCGCACCGC GGCCGAGGCG ATCGGGCTGA GAGTCAAGCT GAAGTCGAGC
CCGGCGGCCG TCTACTCGAA CCTCTTCGTC GACGCCGACG CGCGCAAGCA GGTCGACGCG
TTCGCGACGA TGAACTACGC CAACTGGGGC GACCCGGCGT CGCTCTACGC GCCGCTGACG
TTCGCCGACG GCAGCCAGAA CTACTACGGC TACAGATCCT CCGCCGCGAG CGCCAAGCTG
GAGCAGGCGC GCGCCACCGC CGATCCGCAG GAGCGCGCGC GGCTCGTCAC CGAGGCGCAG
CAGACGATCA CCGAGGAGCT GCCCTGGATC GCGACCGTCT CGCCGCACAC GGTGCTCGTG
ATGAGCTCGA AGCTGACCGG CGCGCCGGCC TCCTCGGTCT ACCTGTCGTC CCCCTGGGCC
GACACGCTCG GCGGGAGAGG GTAG
|
|---|
| Protein sequence | MRAHSFRAVA GAVAVGVALL GAGCGRSSED AGGTTAGVSR SAPLSATTPA GSAEVDSATW
AMYRDTITVD PIFAGDYPER QVVALMCESL LRQQPDGTTA PGLARLSYRD PRTVVLTLAD
GVRFWDGSPL TPADVVYSID RNRDPRVGGY WASNFGSVDT VTVTGEHEVT LKLRRPDYWL
EGVLSFMAGV VVKKSYAQER GKDYGTPSGG AMCTGSYRLG AWRTGGAVQL VRNDDYWNSG
VRPHVRELSF KGVPDHSALT AGLLTGEIDG TYPLGLSTLD QLRQSDAVEV YEGPSYMVGA
MILNLDGPLG DVRVRQALSL ALDRQGIVAT TFKGTAEPSR ALASPGTWGY AKDVFSAAWD
ALPAPEPDLD AARRLVEEAG ASGREITIAT SSELQNIDTD ANAYRTAAEA IGLRVKLKSS
PAAVYSNLFV DADARKQVDA FATMNYANWG DPASLYAPLT FADGSQNYYG YRSSAASAKL
EQARATADPQ ERARLVTEAQ QTITEELPWI ATVSPHTVLV MSSKLTGAPA SSVYLSSPWA
DTLGGRG
|
|---|
| |