Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cwoe_1252 |
Symbol | |
ID | 8731690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Conexibacter woesei DSM 14684 |
Kingdom | Bacteria |
Replicon accession | NC_013739 |
Strand | + |
Start bp | 1311613 |
End bp | 1313565 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 646501869 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_003393056 |
Protein GI | 284042716 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0892214 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCCGCC TGCGTCGCCC GTCCGTCGTG CTCGGGCTCG CGATCGTCAC GCTGCTGCTG CTCTGCACGC TGTTCGCGGG GCTGCTCGCG CCGCACGACC CGAACGCGAT CGCCCCGAGC GAGAAGTTCC TGCCGCCGGC GTGGGAGGAG GGCGGCGACG CCTCCTACCT GCTCGGCACC GACCAGCTCG GCCGCGACGT GCTGAGCCGC CTGATCTACG GCGCGCGCAC GTCGCTGATG ATCGCCGGCG TCGCCGTCGT GCTGGCTGCG GCGTTCGGGA TCGCGATGGG GATGCTGTCG GGCTTCTACC GCGGCTGGGT CGACACCGTG ATCATGCGGC TCGCCGACGT CCAGCTGGCG TTCCCGTTCA TCCTGCTGGC GCTCGCGATC CTCGCCGTCT CGGACACGAA GTCGGCGATC CGGATCATCT TCGTGCTGGC GATCGCCGAC TGGGTGATCC ACGCGCGCGT CGTGCGCAGC CGCGTGCTCG TCGAGCGCGA GAAGGAGTAC GTGCGCGGAG CGCGCGCGCT CGGCGCCTCG AACGCGCGCA TCATGCTGCG CTACATCCTG CCGAGCGTGC TGCCGACCGC GCTCGTGATC GCGTTGATCG AGCTGGCGGT GCTGATGCTG CTGGAGTCGA TCCTCGCGTT CCTCGGGCTC GGCATCGACC CGCCCGCCGT CTCGTGGGGC ACGGTCCTCG CGGACGGGCG CGAGAACGTC GCGATCGCCT GGTGGATGCT CGTCTTCCCC GGCATGGCGA TCTTCCTCGC GGTGCTGGCG ATGAACCTCG TCGCCGACGG CCTCGCCGAC GTGCTCGACC CGCGGCTGAA GCTGACGGGC CGGTTCGCGC GCGGCGCGGC GCGCAAGCGG GAGCGGCCGG TCGTGCCGGT CGCCGGCGGC TCGCCGCTCG TCGCGGGCGC CGTCGCCGAC GCGTCGGCCG ACCCGCCGCT GCTCGCGGTC GCGGGCCTGC GGGTCGAGTT CCCGACCGAC GACGGCCCGG TCGTGCAGGC GGTGCAGGAC GTCTCGTTCT CGCTGCGTGC CGGCGAGCGG GTCGGGATCG TCGGCGAGAG CGGCTCGGGC AAGTCGGTCT CGGCGCTCGC GATCATGGGG CTGCTCGACG CGCCCGGCCG CGTCGCGGCC GGCTCGGTGC GGCTGCGCGG CCGCGAGCTG CTCGACTGCT CCGAGCGCGA GCTGAACAAG GTCCGCGGCC GCGAGCTGGG GATGATCTTC CAGGATCCGG GCTCGTCGCT GAACCCGGTC TTCAAGATCG GCTGGCAGGT CGCCGAGGCG ATCGAGCTGC ACCAGGAGTG CGGGAAGGGC GAGGCGCGCA GACGCGCGAT CGAGGCGCTG CGGCTCGTCA ACATCCGCGA TCCCGAGCGT GTCGCCGACT GCTACCCGTT CGAGGTCTCG GGCGGGATGC AGCAGCGCGT GATGATCGCG ATGGCGCTGT CGTGCCGGCC GGGCGTGCTG ATCGCCGACG AGCCGACGAC GGCGCTCGAC GTGACGACGC AAGCGCAGAT CCTGCGCGAG CTGGACGCGC TCGTGGACGA GCTGGACACC GGCGTCGTGC TGATCACGCA CGACCTCGGC GTCGTCGCCG AGTTCACCGA CCGCACGATC GTGATGTACG CCGGCAGCGT CTGCGAGTCG GGGCCGACTG AGCAGCTGAT CGCCGAGCCG CGCCACCCCT ACACGCGCGC GCTGCTCGAC GCCGTGCGCG AGCTGGAGGG CGAGGAGGGC GTCGCTGAGA CGGTTCGCGG CGAGCCGCTG GACCCGCGCG ACCGGCCGCC GGGCTGTCCG TTCGCGCCGC GCTGCCCGCT GGCGATGGAC GTCTGCCGCG AGCAGGCGCC GCGCCTGGTC GGCGAGGACG GCGAGGACGG CGAGCGCGCG GTCGCGTGCT TCGCCGCGAA CCCCGAGGAG GTGAGCCCGC ATGAGCACGC TGCGCGTCGA TGA
|
Protein sequence | MRRLRRPSVV LGLAIVTLLL LCTLFAGLLA PHDPNAIAPS EKFLPPAWEE GGDASYLLGT DQLGRDVLSR LIYGARTSLM IAGVAVVLAA AFGIAMGMLS GFYRGWVDTV IMRLADVQLA FPFILLALAI LAVSDTKSAI RIIFVLAIAD WVIHARVVRS RVLVEREKEY VRGARALGAS NARIMLRYIL PSVLPTALVI ALIELAVLML LESILAFLGL GIDPPAVSWG TVLADGRENV AIAWWMLVFP GMAIFLAVLA MNLVADGLAD VLDPRLKLTG RFARGAARKR ERPVVPVAGG SPLVAGAVAD ASADPPLLAV AGLRVEFPTD DGPVVQAVQD VSFSLRAGER VGIVGESGSG KSVSALAIMG LLDAPGRVAA GSVRLRGREL LDCSERELNK VRGRELGMIF QDPGSSLNPV FKIGWQVAEA IELHQECGKG EARRRAIEAL RLVNIRDPER VADCYPFEVS GGMQQRVMIA MALSCRPGVL IADEPTTALD VTTQAQILRE LDALVDELDT GVVLITHDLG VVAEFTDRTI VMYAGSVCES GPTEQLIAEP RHPYTRALLD AVRELEGEEG VAETVRGEPL DPRDRPPGCP FAPRCPLAMD VCREQAPRLV GEDGEDGERA VACFAANPEE VSPHEHAARR
|
| |