Gene Cthe_3227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3227 
Symbol 
ID4810267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3825605 
End bp3826408 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content39% 
IMG OID640108661 
Productcopper amine oxidase-like protein 
Protein accessionYP_001039615 
Protein GI125975705 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAG TAGCATTGGT ATTAGCGATT GTGAGCGTGT TTATTATGTT GGTATCAGTT 
GCGGAAGCTG CGATAGAATT GCCGTTGAGA GTTGAAGTAA ACGGAGAAAG AGTATATTTT
CCGGACGAGC AGCCATTTAT CGATTCAAAC GGGAGGACCC AGGTACCGGC GAGATTTATA
GCGGAGAAGT TGGGAGCGAA TGTAACATGG GATGGAAAAG AGAAAAAGGC AGTGTTTGAG
AAAGGAAGCA AGAAACTTGT TTTGTACATA GGGAAAGCAG AATATGAATT AAACGGAGAG
CAGAAGAAAA TGGATACAGC TGCGCTGCTG ATATCAGGAA GGACATTTGT GCCTGCAAGA
TATGTGGCAG AGGCTTTTGA TGCAAAAGTG AGCTGGGACC CGGATATAAG GACTGTATAC
ATAAATACAA ATTCGAAGCC ATCTGGCAAA AAGGAAGGAA CCGAGATAGT TGCTGGATTT
GAGGTGCCTT TGGATACTAA TTTGTTAGCT GTAGAGACAA CATGGGGTGG AAAAACAGAG
GCCTGTTTTG AAATAAATTT ACTGAGAGCG GATGTAGAAG GACAAATTGA GGATTTAAGA
CAAATACTTT TACAAAAATG TGACAGCAGT ACAGTGGATG AAGTTATAGC TTATGTTTCG
CAAAAGAAGG AAAGAGAATA CTACTTGCCG TCAAAATATA TATATGATAA CAAAAGCAAA
AGATATATTT GGATAAAAGA ATCTTTTATG GAAGACATAA ATGTTTTTTA TTGTTCTGCA
AGCTATAAAA GGTCGGAAGA ATAA
 
Protein sequence
MKKVALVLAI VSVFIMLVSV AEAAIELPLR VEVNGERVYF PDEQPFIDSN GRTQVPARFI 
AEKLGANVTW DGKEKKAVFE KGSKKLVLYI GKAEYELNGE QKKMDTAALL ISGRTFVPAR
YVAEAFDAKV SWDPDIRTVY INTNSKPSGK KEGTEIVAGF EVPLDTNLLA VETTWGGKTE
ACFEINLLRA DVEGQIEDLR QILLQKCDSS TVDEVIAYVS QKKEREYYLP SKYIYDNKSK
RYIWIKESFM EDINVFYCSA SYKRSEE