Gene Cthe_3211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3211 
Symbol 
ID4809513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3803185 
End bp3804786 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content34% 
IMG OID640108645 
Producthypothetical protein 
Protein accessionYP_001039599 
Protein GI125975689 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAAAT GTATTCAGTT TGACATTCAG GCACTGGAGC CTTTGAAACT TGGCAAATTT 
GAAAGGGATT CAAATAATGA GTACAGCTAT TCATATATTC CGGGTTCTGT AGTAAAAGGA
GCCGTTGCTT GGGGATTGGT TGAAGAAAAA GGCTTTGTTC CGAAGGAGAT ATTGAACGGC
AGTTCAATAT TTTACAATGC TTATCCTTTG CTGGATGGTA ATCCTGCAAT ACCAATGATG
CAGGGGTATA TGGGTGATAA GCAGGAGATA CGTTCAAATA AAGATAATGT CCGTGTGGTA
CACTCATTTA ACAGAAAAAT AGAAAACAGC ATTCCTTTAA ACAATTATGA ATTTGTGGTT
AAAGATGCGG AAAATGAAAA GCTCCTGCTG GGATATAATC CGGGAAAGAT CGAAAATCTT
CATATCAATA AAAAAGATGC GTTAAATGAC AGTAGTAAAT TAAAAATGTT CAGATATGAG
GCAATAAGAA AAGGTGAATG CTTTAGGGCC TATATTCGAG TTCCTGAGGA GCATTATGAT
GACATAGTAA AGATATTGAG TAAAGATTAT ATTTATTTCG GCGGTTCAAG GGGAAGTGGC
TATGGAAAGT GCAGAGTAAC CGGTATAAAA GAAGTTTCTG CTGTTTGTTT GTATGAATCG
GATTTGGATA TTAAAGAGGA TTTATATATT TACTTTTTAT CCGATGCAAT ACTGTATTAC
GACGGTAAAG TTAATACATA CATACCGGAA AATGAATTAA AAGAAATGCT TGGAATTGAA
GGTAAATGTG AATATGTAGA GTCCTATTCC GGTCTTGGAG TTGCGGCGTC TTACAATACT
TTATACAGAA CAAATACAGT TTGCTACACT GCTGTATTGA AGGGAAGTGT AATAAAATAC
AGAGTGGAAG GAAAGATTAA CCCGGATAGA ATAAAAAAAT TGGCATCTGA AGGTGTTGGG
CTAAGAAGAG AGGACGGATA TGGCCAAATT GCCGTATTGG GCAAAATTCA AGATGATATG
GTCGTTTCAA GATATAGGAA AAATGATATT GTTGAAAAAT CAGATATTGA ACTTACAGAT
GAGGACAAAC GTGTTGTAAA TATGATTTTA TGTAATATTT TTAAGACCCG GTCAAAACTT
CAAATTGAAA AAATGGTAAT AGAACTGCTA AAAGATGTAA ACAGACCGCA AGAGAGTCTT
CAAAGTCAAA TAGGAAAGCT TCTTAATATT TTTCAGAATG GTTTCTACCA GACGGAAGAT
GACTTTAGAA AATATTTGAA TGAATATCTT GAACATATAA GAAAGAAAAA GGGAAAGGCC
GTATGGCATA AATTGTATGA CTTTACTGTT GCAAACACTT TGGACAAGTT CAGATCAGAA
AGATTAAGTA TTCAAAAAAT GCTTGAGGAT TTTGTACAGA ATAAATTCAA TTCTGTTTTC
CGTGAAATTG AGAATATTGT GAATAAAGGC ATTACTTTGG GTATTTACAA ATATCCTGTT
GAAAGTCAAA AAGCTCAAGT TCTACATAAT CTTAAAATGG ACTTCTTTAT CAGCTTTTTT
GAATACTGTC TGAGGATGAA AGAAAAAGAG GTGATATCAT GA
 
Protein sequence
MHKCIQFDIQ ALEPLKLGKF ERDSNNEYSY SYIPGSVVKG AVAWGLVEEK GFVPKEILNG 
SSIFYNAYPL LDGNPAIPMM QGYMGDKQEI RSNKDNVRVV HSFNRKIENS IPLNNYEFVV
KDAENEKLLL GYNPGKIENL HINKKDALND SSKLKMFRYE AIRKGECFRA YIRVPEEHYD
DIVKILSKDY IYFGGSRGSG YGKCRVTGIK EVSAVCLYES DLDIKEDLYI YFLSDAILYY
DGKVNTYIPE NELKEMLGIE GKCEYVESYS GLGVAASYNT LYRTNTVCYT AVLKGSVIKY
RVEGKINPDR IKKLASEGVG LRREDGYGQI AVLGKIQDDM VVSRYRKNDI VEKSDIELTD
EDKRVVNMIL CNIFKTRSKL QIEKMVIELL KDVNRPQESL QSQIGKLLNI FQNGFYQTED
DFRKYLNEYL EHIRKKKGKA VWHKLYDFTV ANTLDKFRSE RLSIQKMLED FVQNKFNSVF
REIENIVNKG ITLGIYKYPV ESQKAQVLHN LKMDFFISFF EYCLRMKEKE VIS