| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3164 |
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| Symbol | |
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| ID | 4809614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3738385 |
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| End bp | 3740019 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640108597 |
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| Product | two component AraC family transcriptional regulator |
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| Protein accession | YP_001039552 |
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| Protein GI | 125975642 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0633186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTTGCCG TTATGGTAGT CGATGATGAT CCTAAGATAC GGGAATGGTT TGAAGTTGAA
ATAGAATGGG GAAAGATGGG ATTTGATTTT ATCTGTTCAG CCAAGGATGG AATTGACGCG
CTCAACAAAT TGAATCAGCA TAATAAGTTG GATCTTGTAA TTTCTGATAT AGATATACCT
AAAATGAATG GCATAGAATT GCTTAATTCC ATAAAAGAAT ACAATCTTTC TTCGATGATT
GTCTTGTTAA GTGATGAGAA CAACATGGCC CATGTCAAGC AGGGGTTGCT TCTGGGAGCA
TTTGATTACA TATTGAAACC TTTGGATAAG GATAAAGTAA TTGATGTTCT CAAAAAAGCC
CATGATTCTC TTATGGATAA AAAAATGGAG GAAGAAAGAA ATAAAAACCT GAAGAAGAAG
CTGGAGCTGA ATCTTTCTCT TTCCAGAGAT AAAATTTTAC AAGATTTGTT AAGGGGAAAG
GAATTTCCTT TTCAGGAGCT TGACTATATT CAGAACGAAT ATAATATCAG TCTTCAAAAA
GGAATGGTAC AGGTCGGCAT TATAGAAATC GGAAACTTTG ATGCCGATTC CAGAGAGCTT
ATTAAAAGCG GAAGATTTGA CAGCCTGGTG GAGGAAGTCG GAAAAATTAT TTCAAATACT
TTGTCGGAAT TTCCGGAGTT AAACTGCAAC ATGGTGGAAA TGGATATCGG GCTTATCAGC
GTTATCCTTC AGCCGGTGGG TCAAAAGGAG CTTCAGGACT TTGAAGATAT GACCGCGGAC
TTTTTCGAAA AAGTGCTCAA AGGAATAAAG CAGGATGCCA ACATGCGTGC AACCATCGGT
ATTGGCGGAG CGTATTCGAG CCTGAGAGAC ATAAGCCAAA GTTACATGGG GGCAAAAGCG
GCTCTGCGCC ACAAGTTCAT TTTGGGCGGC AACAGAGTTA TTCATATAAA GACTGATTAT
AATGAAAAGC AAAACCTTCT GTACCCCGCC GAAAGGGAAA AAATGCTAGT GGAATCCATA
ATGTCCGGGG ATGACAATGC TTTAAAACTT GCCGAGAATA TGTTTGACGA CATTGCGATA
GGTACGGGGG ACAATCTTAA AAGGATAGCT TTTGCTGCCA ATCAGCTGGT CTTTAACATA
TCGAACTTTA TCGACATGCA GTATGATTTT ATTAATAAAC TGTATGACTT CAGAAAGTTT
AACAATATGG ATTTTTCCAA ATTTTCATCA AAGGATGAAA TAAAGGAGTT TTTCCTGTCT
TTTGTCACAG AGCTTTTGAA TGTGGTGAAA GAATATAAAC CGGCTCAGAA CAACACTCTT
ATAAAGAAGG CGTGTGAGTA TGTTTTAAAT CATATTGACC AGGAAATAAC TCTTATGACA
ATAGCCGATT ATTTAAATAT CAGCAAAAAC TATTTCTGCT CTTTGTTTAA GCAGGAGACG
GGATATAACT TTTTGGAATA TGTCACCAAA GTAAAAATGG AATGGGCGAA AAAACTCCTG
AGGGAAGGAA ATTATAAAAC CTACGAAGTA AGCGAAATGC TTGGCTACAG AGAGGCAAGC
TATTTTAGCA GACTCTTTAG GAAATATACG AAGCTAAGTC CTGCAGAGTA CAAGAAAAAT
TTTGAAAATC AGTAA
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| Protein sequence | MFAVMVVDDD PKIREWFEVE IEWGKMGFDF ICSAKDGIDA LNKLNQHNKL DLVISDIDIP
KMNGIELLNS IKEYNLSSMI VLLSDENNMA HVKQGLLLGA FDYILKPLDK DKVIDVLKKA
HDSLMDKKME EERNKNLKKK LELNLSLSRD KILQDLLRGK EFPFQELDYI QNEYNISLQK
GMVQVGIIEI GNFDADSREL IKSGRFDSLV EEVGKIISNT LSEFPELNCN MVEMDIGLIS
VILQPVGQKE LQDFEDMTAD FFEKVLKGIK QDANMRATIG IGGAYSSLRD ISQSYMGAKA
ALRHKFILGG NRVIHIKTDY NEKQNLLYPA EREKMLVESI MSGDDNALKL AENMFDDIAI
GTGDNLKRIA FAANQLVFNI SNFIDMQYDF INKLYDFRKF NNMDFSKFSS KDEIKEFFLS
FVTELLNVVK EYKPAQNNTL IKKACEYVLN HIDQEITLMT IADYLNISKN YFCSLFKQET
GYNFLEYVTK VKMEWAKKLL REGNYKTYEV SEMLGYREAS YFSRLFRKYT KLSPAEYKKN
FENQ
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