| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3147 |
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| Symbol | |
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| ID | 4809710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 3717291 |
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| End bp | 3719036 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640108580 |
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| Product | ABC transporter related protein |
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| Protein accession | YP_001039535 |
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| Protein GI | 125975625 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000208385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAAAG ATCTGGCACG AAGCATTCGT GAGTACAAAA AAGTATCAAT TATAACTCCC
ATACTGATAA GCCTGGAAGT GGTGATTGAA TGCATAATCC CATTCATCAC TGCGACTTTG
GTTAACAAAA TCAAAAGCGG ATGTGAATTA AACACAATTA TCAACTATGG TATAGTCTTG
ATTATCATGG CATTTCTGTC GTTGATGTTC GGTGCGATTG CAGGCTCAAC CGCTGCCACT
GCGTCCTGCG GGTTTGCAAA GAATTTAAGA AAAGATATGT TCTATAGTAT TCAGAACTAT
TCTTTTGAAA ATATCGACAA ATTCATGACA TCTTCACTGA TTACCCGTAT GACCACCGAT
GTTACCAATG TGCAGCATGC GTATATGATG CTCATTCGAG TGGCGGTTCG CGCTCCTTTA
ATGTTGATTT TTGCATTTGT AATGGCATTT GTAATGGGCG GGCGCATGGC ATGGATTTTC
CTGGTTGTCG ATCCGTTCCT TGCAATTGGC CTTAGTGTTA TAATTTACAA AGCATTGCCT
TTGTTCAGAA AAGTGTTTAA AAAATATGAC GCTTTAAACC GTTCCATTCA GGAAAACATT
AAAGGTATGC GTGTTGTAAA ATCTTTTGTC CGCGAGGACT ATGAGCAAAA GAAATTTGAT
GCGGCGGCGG AAGATGTGTG CGCGGACTTT ACAAGAGCGG AACGTATTTT GGCTTTTAAC
GGCCCCTTGA TGCAGTTTTG CATGTATGTA GTCATGGTTT TCGTTTTGTC CTTTGGTTCC
TATACGATTA TCACCAGCCG GGGATTGGAT TTTGATATCG GGCAGTTTTC AGCCATATTG
ACATACAACT TTATGATTTT AATGAGCCTT ATGATGCTTT CCATGGTGTT TGTAATGATT
ACCATGGCCG GTGAATCCGC AAAGCGTATT GTTGAAGTAA TTAATGAGAA AAGTACGATG
ACAAATCCGG AAAACCCGAT TTATACGGTA AAAGATGGTT CAATATCCTT TGAGAATGTA
AGTTTCAAAT ATTCCGAAAA GGCAGAAAGA ATGACGCTGG AAAATATAAA TTTGGAGATT
AAATCCGGGG AAACCATCGG AATTATAGGG GGCACAGGTT CTTCAAAGAC GACTCTTGTC
CAGCTGATTC CACGTTTGTA CGACGCTACC GAAGGAGTTG TGAAAGTAGG GGGCGTGGAT
GTAAGAAATT ATGATTTGGA AACTTTGCGC AATGAAGTTG CCATGGTGCT GCAGAAAAAT
GTCCTGTTTT CCGGAACCAT CAAGGAAAAT CTTCGCTGGG GAAACAAAGA TGCCACGGAT
GAAGAATTGA TAGAGGCTTG CAAGCTTGCT TGTGCCCATG AATTTATCAG TCAATTTCCC
AAAGGCTATG ATACCTATAT TGAGCAGGGC GGTACCAATG TGTCGGGCGG ACAGAGGCAA
AGACTCTGTA TTGCAAGGGC GCTTCTGAAA AAACCCAAAA TATTGATTCT GGATGATTCC
ACCAGTGCCG TGGATACCAA GACTGATGCA AAAATTCGCA AGGCACTTAA AAATTACATG
CCCGAGACAA CCAAGATAAT TATCGCCCAG AGAACGGCTT CTGTTGAAGA TGCAGACAGA
ATTATAGTAA TGGATGGCGG AACCATAAAC GGAATCGGAA CCCATGAGCA GTTGCTGGCT
GAGAATACAA TCTACAGGGA AATATATTTT TCTCAAAACA AGGCAGGTGT GGAAAGTGGA
AAATAA
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| Protein sequence | MVKDLARSIR EYKKVSIITP ILISLEVVIE CIIPFITATL VNKIKSGCEL NTIINYGIVL
IIMAFLSLMF GAIAGSTAAT ASCGFAKNLR KDMFYSIQNY SFENIDKFMT SSLITRMTTD
VTNVQHAYMM LIRVAVRAPL MLIFAFVMAF VMGGRMAWIF LVVDPFLAIG LSVIIYKALP
LFRKVFKKYD ALNRSIQENI KGMRVVKSFV REDYEQKKFD AAAEDVCADF TRAERILAFN
GPLMQFCMYV VMVFVLSFGS YTIITSRGLD FDIGQFSAIL TYNFMILMSL MMLSMVFVMI
TMAGESAKRI VEVINEKSTM TNPENPIYTV KDGSISFENV SFKYSEKAER MTLENINLEI
KSGETIGIIG GTGSSKTTLV QLIPRLYDAT EGVVKVGGVD VRNYDLETLR NEVAMVLQKN
VLFSGTIKEN LRWGNKDATD EELIEACKLA CAHEFISQFP KGYDTYIEQG GTNVSGGQRQ
RLCIARALLK KPKILILDDS TSAVDTKTDA KIRKALKNYM PETTKIIIAQ RTASVEDADR
IIVMDGGTIN GIGTHEQLLA ENTIYREIYF SQNKAGVESG K
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