| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_3016 |
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| Symbol | |
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| ID | 4811164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 3539444 |
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| End bp | 3541705 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640108437 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_001039405 |
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| Protein GI | 125975495 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAG GAAAAAGCAA AAGCATAACA AAGAGAATAA CAGTTTCAGG AATAGTTCAG
GGGGTCGGTT TCAGACCCTT TGTCCATAAT ATTGCCAAAA AGCATGGAAT ACCGGGAACC
GTACGAAACA TCGGGGGTTT GGTGGAAATA ATATTGCAAT CCTCTGAGGA AAAATATAAT
GAATTTTTAC AGGATTTAAA GGCAAATGCG CCTGTTGGTT CTGAAATAAC CAATATCGAA
ACGGAAGATA TAAAAGAGCG GGAATTTGAC GGCTTTCGAA TCATTGAAAG CAAGGACGAT
GAAGAAATCT CCATAATCCC GCCGGACCTC CCTGTCTGCG AAAGCTGTGA AAGGGAGCTT
TTCACCGGCA CCGACAGGCG CTTTTTAAAT CCTTTTATCA GCTGCATGTC CTGCGGTGCC
CGGTACACCA TTATAGAAGA GCTTCCCTAT GACAGGCACA ACACCACCAT GAGGGATTTT
GACATGTGCC CTGCCTGCCG GGAAGAATAC ACATCCCCAA GAAACAGGCG CTTTCACGCC
CAAACCATAT CGTGCAATGA CTGCGGGCCC TATTTAATTT TCAATGACCT TACCGGTGGC
AGTGAACTTA CTGAAAAAGA TGCCTTCCAT GCTGCGGCAA ATATCATAGA ATCCGGCGGA
ATAATCGCTG TAAAAGGCAT AGGAGGCTAT CATTTTGCCT GTTCTCCTTT TTTGGAAGAT
ACGGTTTTAA GGCTTAGAGA ATTAAAGGGC CGTGAAGCAA AGCCATTTGC AATAATGTTT
GAATCGGTGG ACTCCATACG CAAATACTGC GTTGTATCGG AAAAAGAAGA AGAACTTTTA
AAGTCAAAGG CAAGGCCCAT TGTTTTACTG TATTTAAAAA ACAACTCCAT GGCACCTTCC
GCCTGTCAGG GCAGCATATA CTGCGGAGCT TTTCTGCCCT ATACTCCTCT GCACATGCTG
CTTGTCAAAA GGTGCGGACC TCTGATTATG ACAAGCGCCA ATATATCCGA CAAGCCCATA
ATAAAGGACG ATTCAGAAAT GCTGTCGTTA AAATCGCCCT TGTTAAACGG TGTTTTATAC
AATAAACGAA GAATTGTACG CTCTGTTGAT GACTCGGTAG CAAAGGTTGT GGCAAATAGC
CCCCAGCTGA TTCGAAGAAG CCGCGGTTAT GTCCCCTACC CTGTTTTTTT AAAAAACAGA
AAAAAGGATT TGCAGATTTT TGCTGCAGGA AGTGACTTAA AAGCAGCCTT CTGCCTTTAC
AAAAACGGAA ACGCGGTAAT GTCCCAATAC TTTGGAGACT TGGAAGAAAA GACGGTTTTG
GAGCGGTATA AAGCCTCGTT CAGGGACCTT TGTCATCTTT TAAAAATTAC TCCCGATATT
GCAGTTTGTG ATATGCACCC AAACTACCAT TCATCCAGGT TTGCCGAAAA CCTGGGCATT
CCGCTCACCT ATGTCCAGCA TCATCATGCA CATGTTGCAT CGGTTATGGC AGAACATCAT
TTAAAGGAAC AGGTAATCGG CGTTGCCTTT GATGGAACGG GCTATGGAAC CGACGGCAAA
ATATGGGGCG GAGAATTTTT AATCTGCGAA GGCGCAGAGT TTAAAAGAGT GGCTCACCTT
CGCTACATCC CTGTTTTGGG CGGTGATTCA TCCATGCGGG ATGCCGCGAA AACCGCCGCT
TGCTTTTTGT TAAACTTGGG TCTTGACCAA TATGTAAAAG ACGAACGCAA GGACATAATA
AAAGCCGCTT TGAAGAATAA TATCAATACC GTGCCCACAT CAAGCATGGG AAGACTGTTT
GACGCCGTTT CATCCCTTTT GGAGATTCAG TATGAAAACC GCTATGAGGG AGAATGTGCG
GCAATGCTGG AAAAAGAGGC AGTTTTGGCT CTAAGGCACA AGATAGAGCC TAAAAAGCTT
GCCTTTGAAA TCAAGCGAAA AAGTGATTTA ATAGAAATAG ATCCAAAACC GATGCTTAAA
TCCATGTGTC ATCTTCAAAA CAAAGATGAC ACAGGTTCTC TTGCATTGGG TTTTCATTAT
GCCGTTGCGG ATATGATATT GGAAGTATGC GAAATAATAC GGGCAGAACA AAAAATTAAC
ACTGTCGCCT TAAGCGGCGG CGTATTTCAA AATACTTTGC TTATGGAACG AACACTCAAG
ATTTTAAGAG ACAGACACTT TAACGTATAC TATAACATGT CGGTTCCCCC AAATGACGGT
TCAATTGGTC TGGGACAGAC GTTTATTGGA TTAGTGAGGT GA
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| Protein sequence | MDKGKSKSIT KRITVSGIVQ GVGFRPFVHN IAKKHGIPGT VRNIGGLVEI ILQSSEEKYN
EFLQDLKANA PVGSEITNIE TEDIKEREFD GFRIIESKDD EEISIIPPDL PVCESCEREL
FTGTDRRFLN PFISCMSCGA RYTIIEELPY DRHNTTMRDF DMCPACREEY TSPRNRRFHA
QTISCNDCGP YLIFNDLTGG SELTEKDAFH AAANIIESGG IIAVKGIGGY HFACSPFLED
TVLRLRELKG REAKPFAIMF ESVDSIRKYC VVSEKEEELL KSKARPIVLL YLKNNSMAPS
ACQGSIYCGA FLPYTPLHML LVKRCGPLIM TSANISDKPI IKDDSEMLSL KSPLLNGVLY
NKRRIVRSVD DSVAKVVANS PQLIRRSRGY VPYPVFLKNR KKDLQIFAAG SDLKAAFCLY
KNGNAVMSQY FGDLEEKTVL ERYKASFRDL CHLLKITPDI AVCDMHPNYH SSRFAENLGI
PLTYVQHHHA HVASVMAEHH LKEQVIGVAF DGTGYGTDGK IWGGEFLICE GAEFKRVAHL
RYIPVLGGDS SMRDAAKTAA CFLLNLGLDQ YVKDERKDII KAALKNNINT VPTSSMGRLF
DAVSSLLEIQ YENRYEGECA AMLEKEAVLA LRHKIEPKKL AFEIKRKSDL IEIDPKPMLK
SMCHLQNKDD TGSLALGFHY AVADMILEVC EIIRAEQKIN TVALSGGVFQ NTLLMERTLK
ILRDRHFNVY YNMSVPPNDG SIGLGQTFIG LVR
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