Gene Cthe_3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3000 
Symbol 
ID4811148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3522402 
End bp3523454 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content45% 
IMG OID640108421 
Productphosphate transporter 
Protein accessionYP_001039389 
Protein GI125975479 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0306] Phosphate/sulphate permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000358421 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGTAT CACTTACTGA TTTTTTAAGT CATTTGATAT CGAGTCCTCC ATTAATTATA 
ACTACTCTTC TTACACTGGG AGTTATAATG GTTAATGGAT GGACGGATGC TCCTAACGCG
ATTGCCACTT GTGTTTCCAC ACGGTCGATA AGTCCGCGTG CGGCTATAGT GATGGCAGCG
TTTTTTGACT TTCTTGGTGT TTTTGTTATG ACCAAGATCA ATGCGAGGGT GGCAGAGACC
ATTTATAAAA TGGTTGATTT CGGAGGAGAC CCTAACAAAG CCCTGGTAGC CCTTTGCGCT
GCTCTTTTTG CAATTGTGCT TTGGGCGACG GCCGCATGGT GGTTTGGAAT TCCAACCAGT
GAAAGCCATG CACTTATTGC CGGAATAAGC GGTGCTGCAA TTGCCCTGCA AAAAGGCCTT
CACGGTATTA ATTTTAATGA GTGGGTTAAT GTCCTTTACG GACTGGCACT GTCCCTGGTA
TTGGGTTTCG CAACGGGATG GACGGTTGTA AAGCTGGTTG AGAAGATTTT TAGAAGAGTC
AACAGGGCAA AAACTTTTGG GTTTTTCAAA AATGCCCAGG TTTTGGCCAG TGCCGGCATG
GCATTTATGC ATGGCGCGCA GGACGGACAG AAATTTATGG GTGTGTTTAT GCTGGGTGTG
TTTTTAACGC AGGGACAAGC ACAAGTGACA GAATTTATCA TACCGAACTG GATGCTTATT
CTTTGCTCGG CAGTCATGGC CACAGGTACT TCCATTGGCG GATATCGAAT TATTAAGGCC
GTAGGAATGG ACATGGTCAA ACTTGAAAAA TATCAAGGTT TTTCTGCCGA CCTTGCCGGC
GTGATATGTT TGCTTACAGC ATCAGTTTTC GGCTTGCCGG TCAGTACCAC TCATACCAAG
ACAACGGCAA TTATGGGCGT TGGAGCGGCA AAACGTATAT CTTCAGTTAA CTGGGGAGTG
GTAAAAGAGA TGGTGTCCGC ATGGGTTCTG ACTTTCCCGG GATGCGGATT GATAGGCTTT
TTGATGGCAT TGCTCTTTAT GAACATATTT TAA
 
Protein sequence
MTVSLTDFLS HLISSPPLII TTLLTLGVIM VNGWTDAPNA IATCVSTRSI SPRAAIVMAA 
FFDFLGVFVM TKINARVAET IYKMVDFGGD PNKALVALCA ALFAIVLWAT AAWWFGIPTS
ESHALIAGIS GAAIALQKGL HGINFNEWVN VLYGLALSLV LGFATGWTVV KLVEKIFRRV
NRAKTFGFFK NAQVLASAGM AFMHGAQDGQ KFMGVFMLGV FLTQGQAQVT EFIIPNWMLI
LCSAVMATGT SIGGYRIIKA VGMDMVKLEK YQGFSADLAG VICLLTASVF GLPVSTTHTK
TTAIMGVGAA KRISSVNWGV VKEMVSAWVL TFPGCGLIGF LMALLFMNIF