| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_2992 |
|---|
| Symbol | |
|---|
| ID | 4811140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 3512983 |
|---|
| End bp | 3513507 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640108413 |
|---|
| Product | ECF subfamily RNA polymerase sigma-24 factor |
|---|
| Protein accession | YP_001039381 |
|---|
| Protein GI | 125975471 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTT TTGAGGAGCT TTGCCAGGAA AATTACAGTA GAATTTATAA ATATATATTC
TCGATGACAG GGAGTAAAGA GTCTACCGAG GATTTAATCC AGGAAGTCTT TATAGCTGCG
TATGAAAAAG GTGAGGCTTT TTTACGGCAT GAAAAACCTG CTGCATTTTT ATACAAAACG
GCACGGAATA TGACAGTTAC CTATTTAAAG AATTTAAAGC GCCAAAGAAT TTCTGCAATG
GAATACCTGT CTGAGAATAT TCCCCAGGAT GACACTGACT TATGTGAAAC GCTCTTGATG
GAATTGGACC GAAAAATCGA TGAGACAGCC TATACCGGAC AAGTAATCGG CAACTTGAAT
ACAAACCAGC ACAATCTGTA TAGACAACGT TATGTCGAAG GCAAGTCAAT CAAAGAAATT
GCTTCAGAAG AGGGTGTCAG TGAAACAGCC ATGCGTATGC GGTTGGTAAG GCTGAGAAAA
GAAATACAGG ATATCGTAAA AAAATTAAAA CTGGGTGAAA AGTAA
|
|---|
| Protein sequence | MKTFEELCQE NYSRIYKYIF SMTGSKESTE DLIQEVFIAA YEKGEAFLRH EKPAAFLYKT
ARNMTVTYLK NLKRQRISAM EYLSENIPQD DTDLCETLLM ELDRKIDETA YTGQVIGNLN
TNQHNLYRQR YVEGKSIKEI ASEEGVSETA MRMRLVRLRK EIQDIVKKLK LGEK
|
|---|
| |