Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2967 |
Symbol | |
ID | 4810855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 3485676 |
End bp | 3486854 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640108389 |
Product | major facilitator transporter |
Protein accession | YP_001039357 |
Protein GI | 125975447 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTCGT TGTTGTTGGC GCTTATTTAT CTCGCTTTTA TCAGTTTGGG ACTGCCCGAT GCACTTCTTG GCTCGGCCTG GCCTACCATG TACCCCGTGC TGGAAGTACC TGTTTCTTTT GCAGGCATAA TATCTATGAT TATTGCAGGG GGTACCATTG TCTCGAGTTT AAATACAAAC CGGGTGGTTC GCAAATTTGG CACCGGACTT GTGACTGCTG TCAGTGTATT GATGACGGCG GTGGCTCTGT TTGGGTTTTC CGTTTCGAAA ACTTTTTGGA TGCTTTGCCT TTGGTCTATT CCATACGGTC TTGGAGCAGG TGCGGTGGAT TCGGCCCTGA ACAATTTTGT GGCACTTCAT TATGCTTCCA GGCACATGAG TTGGCTGCAC TGTTTTTGGG GTATAGGTGC GTCTGTTGGA CCTTATATCA TGAGTTATTG TCTGACAGTT AAGAACAGTT GGGAAAGTGG TTATATGACA GTAGGTGCTT TTCAAATCGT ATTAACAGTT ATTCTCTTTT TCAGTCTGCC TGTTTGGAAC AAGCAGGCAA AGATCAAGAA GGAGAGTCAA ACAGAGGAAC CAAAGCATTT GAAAATTCAT GAGGCATTAA AAATTAAAGG GGTTAAGCAG GTACTAATAG CGTTTTTCTC CTATTGTGCT CTCGAGACCA CTGCAGGCTT GTGGGCCAGC AGTTATCTCG TGCTGCATCA GGGAATTGAG GCAAAAGTGG CTGCAAGATG GGCTTCTTTG TTTTATTTAG GTATTACTTT CGGGCGCTTT CTGAACGGTT TTGTTACTGA CAAATTAGGG AACCGCAATA TGATTCGCAT AGGACTAGGT ATTATAACCA TAGGATTGGC AGCGGTGATT TTGCCGGTGC AAATTGAACT TGTAACGTTG GCAGGTTTGG TTTTAATCGG CATAGGATGC GCTCCTATCT ATCCTTGCAT CATACATGAG ACACCAAAGA ATTTTGGAGC GGAGAATTCT CAGGCTATTA TCGGAATTCA GATGGCAAGT GCTTATACCG GTTCAACATT CATGCCGCCT ATATTTGGTG TGCTGGCAAA ATTTACAACG ATTTCTTTAT ATCCGGTTTA TTTGACATTC TTCCTGATTT TGATGATAGT AATGACGGAA AGGCTTAATC GTCTTGTAGT AAGTAAAGAG AGCAGATAA
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Protein sequence | MYSLLLALIY LAFISLGLPD ALLGSAWPTM YPVLEVPVSF AGIISMIIAG GTIVSSLNTN RVVRKFGTGL VTAVSVLMTA VALFGFSVSK TFWMLCLWSI PYGLGAGAVD SALNNFVALH YASRHMSWLH CFWGIGASVG PYIMSYCLTV KNSWESGYMT VGAFQIVLTV ILFFSLPVWN KQAKIKKESQ TEEPKHLKIH EALKIKGVKQ VLIAFFSYCA LETTAGLWAS SYLVLHQGIE AKVAARWASL FYLGITFGRF LNGFVTDKLG NRNMIRIGLG IITIGLAAVI LPVQIELVTL AGLVLIGIGC APIYPCIIHE TPKNFGAENS QAIIGIQMAS AYTGSTFMPP IFGVLAKFTT ISLYPVYLTF FLILMIVMTE RLNRLVVSKE SR
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