Gene Cthe_2829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2829 
Symbol 
ID4809666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3345548 
End bp3345991 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content40% 
IMG OID640108249 
ProductISDet4, transposase 
Protein accessionYP_001039221 
Protein GI125975311 
COG category[L] Replication, recombination and repair 
COG ID[COG3328] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACATTAA CACACCAGAT AAGAAACACG CTAAAGTATG TGTCAGATAA AGGCCGAAAG 
GAATTTGCCA GGGACTTGAA ACGGATATAT ACGGCTCCGA ATGAGAAGGC AGGGTACGAC
CAGATGCTTG AGGTTTCAGA GAAATGGGAG AAGAAATACC CGGCAGCTAT GAAGAGCTGG
AAGAGCAATT GGGATGTTAT TTGTCCATTT TTTAAGTATT CGGAGGAACT ACGTAAAATC
ATGTATACGA CCAATACTAT TGAGAGCCTG AATAGCAGTT ATAGAAGGAT AAACAAATCA
AGGACAGTAT TTCCTGGCGA CCAGTCACTT TTAAAGAGCA TATATTTAGC TACAGTAAAG
ATTACTTCAA AATGGACGAT GCGTTACAAA AACTGGGGTT TGATACTGGG ACAGCTACAG
ATTATGTTCG AAGGGCGTAT ATAG
 
Protein sequence
MTLTHQIRNT LKYVSDKGRK EFARDLKRIY TAPNEKAGYD QMLEVSEKWE KKYPAAMKSW 
KSNWDVICPF FKYSEELRKI MYTTNTIESL NSSYRRINKS RTVFPGDQSL LKSIYLATVK
ITSKWTMRYK NWGLILGQLQ IMFEGRI