Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_2710 |
Symbol | |
ID | 4810704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 3197608 |
End bp | 3198717 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640108129 |
Product | hypothetical protein |
Protein accession | YP_001039102 |
Protein GI | 125975192 |
COG category | [S] Function unknown |
COG ID | [COG3949] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00210144 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCTCAGG ATGTAAAAAA TATATTGAAA GTTGCAAGCA TTTATATGGC AACGGTGATT GGGGCTGGAT TTGCTTCGGG ACAGGAAATT ATGCAGTTTT TTTCGTCGTA TTACGAGGGG GGATTTTACG GCATTGTTCT GGCAGGAGTT TTGTTTGCGT TGATAGGATA TATTGTGTTA GTAAAAGTCT ACAGCGAAAG AATAAGAAAC TACGAGGAAT TCCTTTTTCC CAGCGTCGGA TGGGTAATTG GCTGGATTAT GGAGATTATG GTAACGTTGT TTATGGGTTC TGTATTGTGC ATAATGGTTG CCGGAGCAGG AAGCATAATA TCCGGTGCGT TAAACATACC TTATCACTAT GGCACGCTGA TAGCTGCAAT TTTATGCATG ATTGTCTTTC TTACTGACAT CAAAGGGATT GTGGCATTAA GTTCTTTTGT GACTCCCATT TTGGTGCTGG GTATTCTTGG AGCAGGATTC TATGTTATAG TCAATATGGA TGCATGGGTA TTCAGCCCTG TACCGGGATT TGATGCGATA ACCGACAACT GGCTCGTCTC TTCTCTTCTC TATGTAAGCT ACAACAGCAT AAGCGGCGTT GCGGTAATGT GCAGCCTTCT GCCTTACTTA AAAAGCAGGA AAATTGCTGC TGCGGGAGGA ATTATCGGCG GGCTTGCGCT AAGTTTTATA GCAATAGTTT TGAACATTAT ACTTTATGTA TTTTATCCCG ATATTGTCTC TGAAGAGATT CCGGTTTTAA GTATAATCGG CAGGCATAAT TTTATTTTGG GAGAATTCTA TAAAATACTG CTTCTTCTTG CAATGTTCAT TTCGGCTGTA ACATCGGGGT ATGGTTTTAT CGAGAGAATA GCAAATAAAG TGAGAATAAG CAGAAAGATA CTGATCCCGG TAATATGCGG CTTTGTTGTG CCAATTTCCA ATGTGGGATT TTCCGGACTT ATATCATCCG TATATCCGGC ATTTGGGTAT GTAGGAATGT TTATGCTCTT TATGATACTG ATCCAGGGAC TAAACATGCT TGTTTCAAAG CTTGCGGCAA GTTTTGCTTT TGTTTCCAGC AAGAGGGAGT ACAAAAACAG GGACCGATAG
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Protein sequence | MSQDVKNILK VASIYMATVI GAGFASGQEI MQFFSSYYEG GFYGIVLAGV LFALIGYIVL VKVYSERIRN YEEFLFPSVG WVIGWIMEIM VTLFMGSVLC IMVAGAGSII SGALNIPYHY GTLIAAILCM IVFLTDIKGI VALSSFVTPI LVLGILGAGF YVIVNMDAWV FSPVPGFDAI TDNWLVSSLL YVSYNSISGV AVMCSLLPYL KSRKIAAAGG IIGGLALSFI AIVLNIILYV FYPDIVSEEI PVLSIIGRHN FILGEFYKIL LLLAMFISAV TSGYGFIERI ANKVRISRKI LIPVICGFVV PISNVGFSGL ISSVYPAFGY VGMFMLFMIL IQGLNMLVSK LAASFAFVSS KREYKNRDR
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