Gene Cthe_2710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2710 
Symbol 
ID4810704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3197608 
End bp3198717 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content41% 
IMG OID640108129 
Producthypothetical protein 
Protein accessionYP_001039102 
Protein GI125975192 
COG category[S] Function unknown 
COG ID[COG3949] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00210144 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCTCAGG ATGTAAAAAA TATATTGAAA GTTGCAAGCA TTTATATGGC AACGGTGATT 
GGGGCTGGAT TTGCTTCGGG ACAGGAAATT ATGCAGTTTT TTTCGTCGTA TTACGAGGGG
GGATTTTACG GCATTGTTCT GGCAGGAGTT TTGTTTGCGT TGATAGGATA TATTGTGTTA
GTAAAAGTCT ACAGCGAAAG AATAAGAAAC TACGAGGAAT TCCTTTTTCC CAGCGTCGGA
TGGGTAATTG GCTGGATTAT GGAGATTATG GTAACGTTGT TTATGGGTTC TGTATTGTGC
ATAATGGTTG CCGGAGCAGG AAGCATAATA TCCGGTGCGT TAAACATACC TTATCACTAT
GGCACGCTGA TAGCTGCAAT TTTATGCATG ATTGTCTTTC TTACTGACAT CAAAGGGATT
GTGGCATTAA GTTCTTTTGT GACTCCCATT TTGGTGCTGG GTATTCTTGG AGCAGGATTC
TATGTTATAG TCAATATGGA TGCATGGGTA TTCAGCCCTG TACCGGGATT TGATGCGATA
ACCGACAACT GGCTCGTCTC TTCTCTTCTC TATGTAAGCT ACAACAGCAT AAGCGGCGTT
GCGGTAATGT GCAGCCTTCT GCCTTACTTA AAAAGCAGGA AAATTGCTGC TGCGGGAGGA
ATTATCGGCG GGCTTGCGCT AAGTTTTATA GCAATAGTTT TGAACATTAT ACTTTATGTA
TTTTATCCCG ATATTGTCTC TGAAGAGATT CCGGTTTTAA GTATAATCGG CAGGCATAAT
TTTATTTTGG GAGAATTCTA TAAAATACTG CTTCTTCTTG CAATGTTCAT TTCGGCTGTA
ACATCGGGGT ATGGTTTTAT CGAGAGAATA GCAAATAAAG TGAGAATAAG CAGAAAGATA
CTGATCCCGG TAATATGCGG CTTTGTTGTG CCAATTTCCA ATGTGGGATT TTCCGGACTT
ATATCATCCG TATATCCGGC ATTTGGGTAT GTAGGAATGT TTATGCTCTT TATGATACTG
ATCCAGGGAC TAAACATGCT TGTTTCAAAG CTTGCGGCAA GTTTTGCTTT TGTTTCCAGC
AAGAGGGAGT ACAAAAACAG GGACCGATAG
 
Protein sequence
MSQDVKNILK VASIYMATVI GAGFASGQEI MQFFSSYYEG GFYGIVLAGV LFALIGYIVL 
VKVYSERIRN YEEFLFPSVG WVIGWIMEIM VTLFMGSVLC IMVAGAGSII SGALNIPYHY
GTLIAAILCM IVFLTDIKGI VALSSFVTPI LVLGILGAGF YVIVNMDAWV FSPVPGFDAI
TDNWLVSSLL YVSYNSISGV AVMCSLLPYL KSRKIAAAGG IIGGLALSFI AIVLNIILYV
FYPDIVSEEI PVLSIIGRHN FILGEFYKIL LLLAMFISAV TSGYGFIERI ANKVRISRKI
LIPVICGFVV PISNVGFSGL ISSVYPAFGY VGMFMLFMIL IQGLNMLVSK LAASFAFVSS
KREYKNRDR