Gene Cthe_2609 details

Gene Information

• Locus tag: Cthe_2609
• ID: 4809031
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium thermocellum ATCC 27405
• Kingdom: Bacteria
• Replicon accession: NC_009012
• Strand: +
• Start bp: 3079400
• End bp: 3079807
• Gene Length: 408 bp
• Protein Length: 135 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 640108023
• Product: ATP synthase F1, epsilon subunit
• Protein accession: YP_001039002
• Protein GI: 125975092
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.182872
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTCGTCGA CATTTTATTT GGAAATACTG ACACCTGAAA GAAAGTTTTT TTGGGGTGAT 
GTTGAGAGCA TTATTGTCAA AACCCCTACA GGAGAGATGG GAATATTGAA AGGCCATATT 
CCTACTGTTG CAGTGATTGA CATCGGTTCA ATAAAGATCA AGAAAGACGG CAAATGGTTT 
GAAGCAGTCC TTAGTGAAGG ATTTATGGAA GTAAAGCAGA ATCATGTGAT TATCCTTGTG 
GATACGGCCG AATGGCCCGA CGAAATAGAT GAGAACAGGG CAAGAGCCGC AAAAGCAAGG 
GCGGAGGAGA GACTTCAAAG GCGAAGAAGC GAAGCGGAAT ATATTCAGTC TAAAGCAGCT 
TTGGCAAGAG CGATGGCACG CCTTAAAGTT AAGGGAAAAT ATAATTAG 

 

Protein sequence

MSSTFYLEIL TPERKFFWGD VESIIVKTPT GEMGILKGHI PTVAVIDIGS IKIKKDGKWF 
EAVLSEGFME VKQNHVIILV DTAEWPDEID ENRARAAKAR AEERLQRRRS EAEYIQSKAA 
LARAMARLKV KGKYN