Gene Cthe_2552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_2552 
Symbol 
ID4809159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3021203 
End bp3022225 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content35% 
IMG OID640107967 
Productradical SAM family protein 
Protein accessionYP_001038946 
Protein GI125975036 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCGG AAATTAAACC CATTTATGGA ACAGAAAGAA TAAAACTGTC TAAAGTCATT 
CCTTTAAAAA CACCTTTTAG CATATTTGTT TTTCCGACAA CCTATTGTAA TTTCAAGTGC
GTATACTGTG CTCATTCTTT GGCATTGGAC GCCATGAAAA AGACTTATGA TTTTGTCCCT
GAAAACATGT CAATGGAGAC ATACGGAAAA TTTATTCACC AAATGAAAAA ATTTCCGGAC
AAACTGAAAA TGTTATGTTT AATGGGACAA GGAGAGCCAT TGATTAATAA AGACATTCCT
GTCATGGTAA AGATGGCTAA AGATGCAGAA ATTGCAGAAA GAGTGGAAAT TATCAGTAAC
GGTTCACTCC TTGACAAAAC AATGTCAGAT CGATTGATAG AAGCCGGTTT GGATACCTTA
AGAATCTCAC TGCAAGGTCT AAATTCAAAA AAATATAAAG ACATATGCGG TGCTAATATT
AATTTCGATG ATTTTATGGA CAATATACGA TATTTTTATG CACATAAAAA CAACACAAAT
TTATTTGTAA AGATTATGGA CGTATGCCTG GAAGAAGGCG AAGAAGAAAA GTTTTACCGG
CTTTTTGAAG ATTGCTCGGA CAGAATGTAT ATCGAAAAAA TGCTGCCGGC ATACGATGGT
GTGGAAATAA CCAAAAATAT GAAGGTAGAG TACGACCGAT ACGGAAGAAA ACATGAAAAA
AGAAATGTGT GTCCTCTGCC GTTTTATATG TTGGGAATTT TCCCCAACGG GGATGTGGAA
CCTTGTGACA CAATTTATAA GCCTATAGTG CTGGGCAATA TAAACAACTC CGAATTAATC
GACATGTGGA ACGGAGAAAA ATTAAGAGAA TTTTGGAAAT TACAATTAAA AGGCAACAGA
TTACAGAACG ATAAATGCAA AGTATGCTGT GCTCCGGACG ATGTTTCCCA TCCTGAAGAT
GTATTGGACG ATGATGTTGA AGAAATATTA AAAAGACTGG AAACAATGGA GAGTAATATA
TGA
 
Protein sequence
MASEIKPIYG TERIKLSKVI PLKTPFSIFV FPTTYCNFKC VYCAHSLALD AMKKTYDFVP 
ENMSMETYGK FIHQMKKFPD KLKMLCLMGQ GEPLINKDIP VMVKMAKDAE IAERVEIISN
GSLLDKTMSD RLIEAGLDTL RISLQGLNSK KYKDICGANI NFDDFMDNIR YFYAHKNNTN
LFVKIMDVCL EEGEEEKFYR LFEDCSDRMY IEKMLPAYDG VEITKNMKVE YDRYGRKHEK
RNVCPLPFYM LGIFPNGDVE PCDTIYKPIV LGNINNSELI DMWNGEKLRE FWKLQLKGNR
LQNDKCKVCC APDDVSHPED VLDDDVEEIL KRLETMESNI